Cobalt in PDB 9bkl: Cobalt Substituted Rubredoxin From Pyrococcus Furiosus Solved By Co/S- Sad

Protein crystallography data

The structure of Cobalt Substituted Rubredoxin From Pyrococcus Furiosus Solved By Co/S- Sad, PDB code: 9bkl was solved by D.Zhou, L.Chen, J.P.Rose, B.C.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.06 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.016, 34.645, 43.347, 90, 90, 90
R / Rfree (%) 14.2 / 18.3

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Cobalt Substituted Rubredoxin From Pyrococcus Furiosus Solved By Co/S- Sad (pdb code 9bkl). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Cobalt Substituted Rubredoxin From Pyrococcus Furiosus Solved By Co/S- Sad, PDB code: 9bkl:

Cobalt binding site 1 out of 1 in 9bkl

Go back to Cobalt Binding Sites List in 9bkl
Cobalt binding site 1 out of 1 in the Cobalt Substituted Rubredoxin From Pyrococcus Furiosus Solved By Co/S- Sad


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Cobalt Substituted Rubredoxin From Pyrococcus Furiosus Solved By Co/S- Sad within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co101

b:8.2
occ:1.00
SG A:CYS9 2.2 6.7 1.0
SG A:CYS42 2.3 5.9 1.0
SG A:CYS6 2.3 5.6 1.0
SG A:CYS39 2.3 4.2 1.0
CB A:CYS39 3.2 4.5 1.0
CB A:CYS6 3.2 5.9 1.0
CB A:CYS9 3.3 8.0 1.0
CB A:CYS42 3.4 7.4 1.0
N A:CYS42 3.8 6.5 1.0
N A:CYS9 3.8 7.0 1.0
CA A:CYS42 4.1 6.2 1.0
CA A:CYS9 4.1 7.6 1.0
CB A:TYR11 4.3 4.8 1.0
CB A:ALA44 4.4 5.1 1.0
CB A:ILE8 4.5 10.3 1.0
CB A:ILE41 4.6 7.8 1.0
CA A:CYS39 4.6 4.6 1.0
CA A:CYS6 4.6 6.7 1.0
C A:CYS42 4.8 6.3 1.0
N A:TYR11 4.8 6.4 1.0
N A:ALA44 4.8 4.2 1.0
C A:CYS9 4.8 8.2 1.0
N A:GLY43 4.8 4.7 1.0
C A:ILE8 4.8 10.6 1.0
C A:ILE41 4.9 7.8 1.0
N A:GLY10 4.9 5.6 1.0

Reference:

D.Zhou, L.Chen, J.P.Rose, B.C.Wang. Cobalt Substituted Rubredoxin From Pyrococcus Furiosus Solved By Co/S-Sad To Be Published.
Page generated: Tue Jul 30 20:04:50 2024

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