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Cobalt in PDB 1ajf: Solution Structure of the P5B Stem Loop From A Group I Intron Complexed with Cobalt (III) Hexammine, uc(Nmr), Minimized Average Structure

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Solution Structure of the P5B Stem Loop From A Group I Intron Complexed with Cobalt (III) Hexammine, uc(Nmr), Minimized Average Structure (pdb code 1ajf). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Solution Structure of the P5B Stem Loop From A Group I Intron Complexed with Cobalt (III) Hexammine, uc(Nmr), Minimized Average Structure, PDB code: 1ajf:

Cobalt binding site 1 out of 1 in 1ajf

Go back to Cobalt Binding Sites List in 1ajf
Cobalt binding site 1 out of 1 in the Solution Structure of the P5B Stem Loop From A Group I Intron Complexed with Cobalt (III) Hexammine, uc(Nmr), Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Solution Structure of the P5B Stem Loop From A Group I Intron Complexed with Cobalt (III) Hexammine, uc(Nmr), Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co19

b:0.0
occ:1.00
CO A:NCO19 0.0 0.0 1.0
N2 A:NCO19 1.9 0.0 1.0
N6 A:NCO19 2.0 0.0 1.0
N1 A:NCO19 2.0 0.0 1.0
N3 A:NCO19 2.0 0.0 1.0
N5 A:NCO19 2.0 0.0 1.0
N4 A:NCO19 2.0 0.0 1.0
HN23 A:NCO19 2.4 0.0 1.0
HN22 A:NCO19 2.5 0.0 1.0
HN53 A:NCO19 2.5 0.0 1.0
HN61 A:NCO19 2.5 0.0 1.0
HN52 A:NCO19 2.5 0.0 1.0
HN11 A:NCO19 2.5 0.0 1.0
HN31 A:NCO19 2.5 0.0 1.0
HN32 A:NCO19 2.5 0.0 1.0
HN12 A:NCO19 2.5 0.0 1.0
HN21 A:NCO19 2.5 0.0 1.0
HN41 A:NCO19 2.5 0.0 1.0
HN13 A:NCO19 2.5 0.0 1.0
HN62 A:NCO19 2.5 0.0 1.0
HN51 A:NCO19 2.5 0.0 1.0
HN63 A:NCO19 2.5 0.0 1.0
HN33 A:NCO19 2.6 0.0 1.0
HN42 A:NCO19 2.6 0.0 1.0
HN43 A:NCO19 2.6 0.0 1.0
N7 A:G6 3.1 0.0 1.0
O6 A:G6 3.4 0.0 1.0
C5 A:G6 3.9 0.0 1.0
N7 A:G5 4.0 0.0 1.0
C6 A:G6 4.0 0.0 1.0
O6 A:G5 4.1 0.0 1.0
C5 A:G5 4.2 0.0 1.0
C8 A:G6 4.2 0.0 1.0
C6 A:G5 4.3 0.0 1.0
H8 A:G6 4.5 0.0 1.0
H3 A:U13 4.6 0.0 1.0
O6 A:G7 4.7 0.0 1.0
H3 A:U14 4.7 0.0 1.0
C8 A:G5 4.7 0.0 1.0
H41 A:C12 4.8 0.0 1.0
O6 A:G8 4.9 0.0 1.0
H42 A:C12 5.0 0.0 1.0

Reference:

J.S.Kieft, I.Tinoco Jr.. Solution Structure of A Metal-Binding Site in the Major Groove of Rna Complexed with Cobalt (III) Hexammine. Structure V. 5 713 1997.
ISSN: ISSN 0969-2126
PubMed: 9195889
DOI: 10.1016/S0969-2126(97)00225-6
Page generated: Sun Dec 13 10:34:10 2020

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