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Cobalt in PDB 1ao1: Interactions of Deglycosylated Cobalt(III)-Pepleomycin with Dna, uc(Nmr), Minimized Average Structure

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Interactions of Deglycosylated Cobalt(III)-Pepleomycin with Dna, uc(Nmr), Minimized Average Structure (pdb code 1ao1). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Interactions of Deglycosylated Cobalt(III)-Pepleomycin with Dna, uc(Nmr), Minimized Average Structure, PDB code: 1ao1:

Cobalt binding site 1 out of 1 in 1ao1

Go back to Cobalt Binding Sites List in 1ao1
Cobalt binding site 1 out of 1 in the Interactions of Deglycosylated Cobalt(III)-Pepleomycin with Dna, uc(Nmr), Minimized Average Structure


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Interactions of Deglycosylated Cobalt(III)-Pepleomycin with Dna, uc(Nmr), Minimized Average Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Co13

b:0.0
occ:1.00
CO B:PL113 0.0 0.0 1.0
NG B:PL113 1.9 0.0 1.0
O1P B:PL113 2.0 0.0 1.0
NB B:PL113 2.0 0.0 1.0
NC B:PL113 2.0 0.0 1.0
NH B:PL113 2.0 0.0 1.0
NJ B:PL113 2.0 0.0 1.0
HB2 B:PL113 2.5 0.0 1.0
HB1 B:PL113 2.5 0.0 1.0
HNC B:PL113 2.6 0.0 1.0
C7 B:PL113 2.8 0.0 1.0
C10 B:PL113 2.8 0.0 1.0
C3 B:PL113 2.8 0.0 1.0
C12 B:PL113 2.9 0.0 1.0
C2 B:PL113 2.9 0.0 1.0
O2P B:PL113 2.9 0.0 1.0
C27 B:PL113 2.9 0.0 1.0
C6 B:PL113 3.0 0.0 1.0
HNK B:PL113 3.1 0.0 1.0
C29 B:PL113 3.2 0.0 1.0
C13 B:PL113 3.2 0.0 1.0
H3X B:PL113 3.2 0.0 1.0
OH1 B:PL113 3.2 0.0 1.0
C14 B:PL113 3.3 0.0 1.0
H29 B:PL113 3.6 0.0 1.0
H6 B:PL113 3.7 0.0 1.0
O1 B:PL113 3.8 0.0 1.0
H2P B:PL113 3.8 0.0 1.0
C1 B:PL113 3.8 0.0 1.0
H2 B:PL113 3.8 0.0 1.0
H3E B:PL113 3.8 0.0 1.0
NK B:PL113 3.9 0.0 1.0
H5E B:PL113 3.9 0.0 1.0
HO1 B:PL113 3.9 0.0 1.0
C5 B:PL113 4.0 0.0 1.0
C30 B:PL113 4.0 0.0 1.0
H13 B:PL113 4.0 0.0 1.0
O12 B:PL113 4.0 0.0 1.0
NE B:PL113 4.1 0.0 1.0
HDB B:PL113 4.1 0.0 1.0
C28 B:PL113 4.1 0.0 1.0
C9 B:PL113 4.1 0.0 1.0
H34 B:PL113 4.2 0.0 1.0
HDC B:PL113 4.2 0.0 1.0
NI B:PL113 4.2 0.0 1.0
H33 B:PL113 4.3 0.0 1.0
H14 B:PL113 4.4 0.0 1.0
C8 B:PL113 4.6 0.0 1.0
CD B:PL113 4.6 0.0 1.0
H1' B:DT9 4.8 0.0 1.0
H5X B:PL113 4.8 0.0 1.0
C33 B:PL113 4.9 0.0 1.0
C34 B:PL113 4.9 0.0 1.0
HBA B:PL113 5.0 0.0 1.0
C4 B:PL113 5.0 0.0 1.0

Reference:

J.Caceres-Cortes, H.Sugiyama, K.Ikudome, I.Saito, A.H.Wang. Interactions of Deglycosylated Cobalt(III)-Pepleomycin (Green Form) with Dna Based on uc(Nmr) Structural Studies,. Biochemistry V. 36 9995 1997.
ISSN: ISSN 0006-2960
PubMed: 9254594
DOI: 10.1021/BI9708951
Page generated: Sun Jul 13 17:22:27 2025

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