Cobalt in the structure of Cobalt(III)-Peplomycin Complex Determined By uc(Nmr) Studies (pdb 1ao4)

The binding sites of Cobalt atom in the structure of Cobalt(III)-Peplomycin Complex Determined By uc(Nmr) Studies (pdb code 1ao4). This binding sites where shown with 5.0 Angstroms radius around Cobalt atom. The 1ao4 structure was solved by J.CACERES-CORTES, H.SUGIYAMA, K.IKUDOME, I.SAITO, A.H.-J.WANG, with NMR in Solution technique. Cobalt Binding Sites: Cobalt binding site 1 out of 1 in 1ao4 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Cobalt in the PDB 1ao4. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Gup1, A: 3fm2, A: Pmy3, A: Peo5, conact list: Atom Atom Distance (A) Co HO3 A:Gup1 4.35 Co NCA A:3fm2 2.00 Co HNC1 A:3fm2 2.35 Co HO4 A:3fm2 4.75 Co O1 A:3fm2 5.00 Co HNC2 A:3fm2 2.43 Co O3 A:3fm2 3.66 Co CA A:3fm2 2.71 Co H3 A:3fm2 3.85 Co OCA A:3fm2 3.11 Co H2 A:3fm2 4.54 Co C3 A:3fm2 4.39 Co C1 A:Pmy3 4.97 Co OH1 A:Pmy3 3.69 Co C8 A:Pmy3 4.51 Co NM A:Pmy3 4.93 Co HO3 A:Pmy3 3.81 Co H3X A:Pmy3 2.94 Co C12 A:Pmy3 2.72 Co C34 A:Pmy3 4.77 Co C28 A:Pmy3 4.03 Co C30 A:Pmy3 4.02 Co HNM A:Pmy3 4.05 Co H6 A:Pmy3 2.98 Co H5X A:Pmy3 4.64 Co H14 A:Pmy3 4.40 Co NI A:Pmy3 4.06 Co NC A:Pmy3 2.04 Co O1 A:Pmy3 4.90 Co H33 A:Pmy3 4.93 Co NE A:Pmy3 4.02 Co HNK A:Pmy3 3.13 Co HNC A:Pmy3 2.58 Co C5 A:Pmy3 4.21 Co NG A:Pmy3 1.87 Co H13 A:Pmy3 3.92 Co H2 A:Pmy3 4.78 Co C13 A:Pmy3 3.14 Co C27 A:Pmy3 2.92 Co OH3 A:Pmy3 3.91 Co HNI A:Pmy3 4.99 Co H29 A:Pmy3 3.21 Co C7 A:Pmy3 2.76 Co NK A:Pmy3 3.89 Co C29 A:Pmy3 2.96 Co H3E A:Pmy3 3.61 Co C2 A:Pmy3 4.42 Co NH A:Pmy3 2.00 Co NJ A:Pmy3 1.97 Co O12 A:Pmy3 3.92 Co HNL A:Pmy3 3.85 Co NL A:Pmy3 4.54 Co C6 A:Pmy3 2.78 Co H34 A:Pmy3 3.76 Co C10 A:Pmy3 2.70 Co H5E A:Pmy3 4.39 Co C9 A:Pmy3 3.99 Co C14 A:Pmy3 3.36 Co H28 A:Pmy3 5.00 Co C3 A:Pmy3 3.02 Co O1 A:Peo5 1.99 Co HO2 A:Peo5 2.99 Co O2 A:Peo5 2.96 interactive model: