Chemical elements
  Cobalt
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    Compounds
    PDB 1a0c-1epy
      1a0c
      1a0e
      1ajf
      1ao1
      1ao2
      1ao4
      1b59
      1b6a
      1bc5
      1bk5
      1bmt
      1bn5
      1boa
      1bsj
      1c0o
      1c0w
      1c21
      1c22
      1c23
      1c24
      1c27
      1c4g
      1cah
      1cb7
      1ccw
      1cia
      1cla
      1clk
      1cob
      1coh
      1d8x
      1d9r
      1ddy
      1dey
      1dio
      1diy
      1dn8
      1dy4
      1dzi
      1e1c
      1e31
      1eex
      1eg6
      1egm
      1egn
      1egv
      1ekh
      1eki
      1ens
      1epy
    PDB 1et4-1k7y
    PDB 1k98-1r6x
    PDB 1r8k-1v9b
    PDB 1vl3-212d
    PDB 222d-2eff
    PDB 2ehd-2j3z
    PDB 2j4j-2r1p
    PDB 2r2s-331d
    PDB 362d-3fqw
    PDB 3ft6-3igy
    PDB 3igz-3o0n
    PDB 3o0o-4req
    PDB 4xim-9icb

Cobalt in the structure of Cobalt Deformylase Inhibitor Complex From E.Coli (pdb 1bsj)






The binding sites of Cobalt atom in the structure of Cobalt Deformylase Inhibitor Complex From E.Coli (pdb code 1bsj). This binding sites where shown with 5.0 Angstroms radius around Cobalt atom.
The 1bsj structure was solved by B.HAO, W.GONG, P.T.RAJAGOPALAN, Y.HU, D.PEI, M.K.CHAN, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)20.0-3.0
Space groupP6522
a (A)99.080
b (A)99.080
c (A)111.040
alpha (°)90.00
beta (°)90.00
gamma (°)120.00
Rfactor (%)16.8
Rfree (%)20.7


Cobalt Binding Sites:

Cobalt binding site 1 out of 1 in 1bsj


Cobalt binding site 1 out of 1 in 1bsj
Click to enlarge
stereopicture of Cobalt binding site 1 out of 1 in 1bsj
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Cobalt in the PDB 1bsj. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Gln50, A: Gly89, A: Cys90, A: Leu91, A: His132, A: Glu133, A: His136, A: Mln171, A: Hoh172, A: Hoh183,

conact list:


AtomAtomDistance (A)
CoNE2 A:Gln503.61
CoOE1 A:Gln504.11
CoCD A:Gln504.02
CoO A:Gly894.53
CoCB A:Cys903.39
CoSG A:Cys902.38
CoC A:Cys904.70
CoCA A:Cys903.87
CoN A:Leu914.56
CoNE2 A:His1322.08
CoND1 A:His1324.23
CoCD2 A:His1323.01
CoCE1 A:His1323.12
CoCG A:His1324.20
CoOE1 A:Glu1334.81
CoOE2 A:Glu1334.36
CoCD A:Glu1334.96
CoNE2 A:His1362.10
CoND1 A:His1364.25
CoCD2 A:His1363.00
CoCE1 A:His1363.15
CoCG A:His1364.20
CoP1 A:Mln1713.27
CoO3 A:Mln1712.17
CoC5 A:Mln1713.97
CoO2 A:Mln1714.09
CoC7 A:Mln1714.26
CoO4 A:Mln1713.12
CoO A:Hoh1724.54
CoO A:Hoh1833.28

interactive model:




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