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Cobalt in PDB 1c0o: Solution Structure of the P5 Hairpin From A Group I Intron Complexed with Cobalt (III) Hexammine, uc(Nmr), 19 Converged Structures

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Solution Structure of the P5 Hairpin From A Group I Intron Complexed with Cobalt (III) Hexammine, uc(Nmr), 19 Converged Structures (pdb code 1c0o). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Solution Structure of the P5 Hairpin From A Group I Intron Complexed with Cobalt (III) Hexammine, uc(Nmr), 19 Converged Structures, PDB code: 1c0o:

Cobalt binding site 1 out of 1 in 1c0o

Go back to Cobalt Binding Sites List in 1c0o
Cobalt binding site 1 out of 1 in the Solution Structure of the P5 Hairpin From A Group I Intron Complexed with Cobalt (III) Hexammine, uc(Nmr), 19 Converged Structures


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Solution Structure of the P5 Hairpin From A Group I Intron Complexed with Cobalt (III) Hexammine, uc(Nmr), 19 Converged Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co15

b:0.0
occ:1.00
CO A:NCO15 0.0 0.0 1.0
N1 A:NCO15 2.0 0.0 1.0
N6 A:NCO15 2.0 0.0 1.0
N5 A:NCO15 2.0 0.0 1.0
N4 A:NCO15 2.0 0.0 1.0
N3 A:NCO15 2.0 0.0 1.0
N2 A:NCO15 2.0 0.0 1.0
HN51 A:NCO15 2.5 0.0 1.0
HN43 A:NCO15 2.5 0.0 1.0
HN11 A:NCO15 2.5 0.0 1.0
HN52 A:NCO15 2.5 0.0 1.0
HN12 A:NCO15 2.5 0.0 1.0
HN53 A:NCO15 2.5 0.0 1.0
HN63 A:NCO15 2.5 0.0 1.0
HN42 A:NCO15 2.5 0.0 1.0
HN61 A:NCO15 2.5 0.0 1.0
HN41 A:NCO15 2.5 0.0 1.0
HN13 A:NCO15 2.5 0.0 1.0
HN21 A:NCO15 2.5 0.0 1.0
HN62 A:NCO15 2.5 0.0 1.0
HN23 A:NCO15 2.5 0.0 1.0
HN33 A:NCO15 2.5 0.0 1.0
HN31 A:NCO15 2.5 0.0 1.0
HN32 A:NCO15 2.5 0.0 1.0
HN22 A:NCO15 2.5 0.0 1.0
O4 A:U12 4.1 0.0 1.0
N7 A:G2 4.2 0.0 1.0
O4 A:U4 4.3 0.0 1.0
O6 A:G2 4.3 0.0 1.0
O6 A:G3 4.4 0.0 1.0
H3 A:U12 4.5 0.0 1.0
O6 A:G11 4.8 0.0 1.0
H3 A:U4 4.8 0.0 1.0
C5 A:G2 4.9 0.0 1.0
N7 A:G3 4.9 0.0 1.0
H41 A:C13 4.9 0.0 1.0
C6 A:G2 4.9 0.0 1.0

Reference:

G.Colmenarejo, I.Tinoco Jr.. Structure and Thermodynamics of Metal Binding in the P5 Helix of A Group I Intron Ribozyme. J.Mol.Biol. V. 290 119 1999.
ISSN: ISSN 0022-2836
PubMed: 10388561
DOI: 10.1006/JMBI.1999.2867
Page generated: Sun Dec 13 10:34:18 2020

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