Cobalt in the structure of Phosphoglucomutase Vanadate Based Transition State Analog Complex (pdb 1c4g)

The binding sites of Cobalt atom in the structure of Phosphoglucomutase Vanadate Based Transition State Analog Complex (pdb code 1c4g). This binding sites where shown with 5.0 Angstroms radius around Cobalt atom. The 1c4g structure was solved by S.BARANIDHARAN, W.J.RAY JR., with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 6.0-2.7 Space group P41212 a (A) 174.420 b (A) 174.420 c (A) 101.100 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 19.2 Rfree (%) 29 Cobalt Binding Sites: Cobalt binding site 1 out of 1 in 1c4g Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Cobalt in the PDB 1c4g. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Ser116, A: His117, A: Lys129, A: Asp287, A: Asp289, A: Asp291, A: Arg292, A: Lys388, A: Vg1563, conact list: Atom Atom Distance (A) Co CB A:Ser116 3.57 Co OG A:Ser116 2.20 Co C A:Ser116 4.66 Co CA A:Ser116 4.12 Co N A:His117 4.64 Co NZ A:Lys129 4.56 Co CB A:Asp287 4.28 Co OD2 A:Asp287 2.27 Co OD1 A:Asp287 4.21 Co CG A:Asp287 3.41 Co N A:Asp289 4.76 Co CB A:Asp289 4.55 Co OD2 A:Asp289 2.29 Co OD1 A:Asp289 3.25 Co CG A:Asp289 3.11 Co N A:Asp291 4.47 Co CB A:Asp291 4.43 Co OD2 A:Asp291 3.65 Co C A:Asp291 4.83 Co OD1 A:Asp291 2.28 Co CG A:Asp291 3.22 Co CA A:Asp291 4.75 Co N A:Arg292 4.61 Co CB A:Arg292 4.90 Co CD A:Arg292 4.51 Co CG A:Arg292 4.03 Co NE A:Arg292 4.44 Co CE A:Lys388 4.87 Co NZ A:Lys388 4.13 Co OV2 A:Vg1563 3.66 Co V A:Vg1563 2.70 Co OV3 A:Vg1563 3.58 Co OV1 A:Vg1563 2.04 Co O6 A:Vg1563 4.44 interactive model: