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Cobalt in PDB 1dey: uc(Nmr) Solution Structure of Co(II)-Bleomycin A2

Cobalt Binding Sites:

The binding sites of Cobalt atom in the uc(Nmr) Solution Structure of Co(II)-Bleomycin A2 (pdb code 1dey). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the uc(Nmr) Solution Structure of Co(II)-Bleomycin A2, PDB code: 1dey:

Cobalt binding site 1 out of 1 in 1dey

Go back to Cobalt Binding Sites List in 1dey
Cobalt binding site 1 out of 1 in the uc(Nmr) Solution Structure of Co(II)-Bleomycin A2


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of uc(Nmr) Solution Structure of Co(II)-Bleomycin A2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co2

b:0.0
occ:1.00
NH A:BLM1 1.9 0.0 1.0
NG A:BLM1 1.9 0.0 1.0
O70 A:BLM1 2.0 0.0 1.0
NC A:BLM1 2.0 0.0 1.0
NB A:BLM1 2.0 0.0 1.0
NJ A:BLM1 2.0 0.0 1.0
HB1 A:BLM1 2.4 0.0 1.0
HNC A:BLM1 2.5 0.0 1.0
HB2 A:BLM1 2.5 0.0 1.0
C7 A:BLM1 2.8 0.0 1.0
C3 A:BLM1 2.8 0.0 1.0
C12 A:BLM1 2.8 0.0 1.0
C10 A:BLM1 2.8 0.0 1.0
C6 A:BLM1 2.8 0.0 1.0
C2 A:BLM1 2.9 0.0 1.0
C70 A:BLM1 2.9 0.0 1.0
C29 A:BLM1 3.0 0.0 1.0
C27 A:BLM1 3.0 0.0 1.0
HNQ2 A:BLM1 3.0 0.0 1.0
H3E A:BLM1 3.1 0.0 1.0
C13 A:BLM1 3.1 0.0 1.0
HNK A:BLM1 3.3 0.0 1.0
NQ A:BLM1 3.4 0.0 1.0
C14 A:BLM1 3.4 0.0 1.0
H29 A:BLM1 3.5 0.0 1.0
H5X A:BLM1 3.6 0.0 1.0
C5 A:BLM1 3.7 0.0 1.0
H6 A:BLM1 3.7 0.0 1.0
C1 A:BLM1 3.7 0.0 1.0
H34 A:BLM1 3.8 0.0 1.0
H3X A:BLM1 3.8 0.0 1.0
H2 A:BLM1 3.8 0.0 1.0
NK A:BLM1 3.8 0.0 1.0
H13 A:BLM1 4.0 0.0 1.0
OH1 A:BLM1 4.0 0.0 1.0
C30 A:BLM1 4.0 0.0 1.0
O12 A:BLM1 4.0 0.0 1.0
C9 A:BLM1 4.1 0.0 1.0
O68 A:BLM1 4.1 0.0 1.0
NE A:BLM1 4.1 0.0 1.0
C28 A:BLM1 4.1 0.0 1.0
NI A:BLM1 4.2 0.0 1.0
HNL A:BLM1 4.2 0.0 1.0
H68 A:BLM1 4.3 0.0 1.0
HNQ1 A:BLM1 4.3 0.0 1.0
O1 A:BLM1 4.4 0.0 1.0
NA A:BLM1 4.4 0.0 1.0
C4 A:BLM1 4.4 0.0 1.0
H14 A:BLM1 4.4 0.0 1.0
HA1 A:BLM1 4.5 0.0 1.0
HD1 A:BLM1 4.6 0.0 1.0
C8 A:BLM1 4.6 0.0 1.0
H5E A:BLM1 4.7 0.0 1.0
HO58 A:BLM1 4.7 0.0 1.0
ND A:BLM1 4.7 0.0 1.0
H33 A:BLM1 4.8 0.0 1.0
O67 A:BLM1 4.8 0.0 1.0
C68 A:BLM1 4.8 0.0 1.0
C34 A:BLM1 4.8 0.0 1.0
NL A:BLM1 4.9 0.0 1.0

Reference:

T.E.Lehmann, M.L.Serrano, L.Que Jr.. Coordination Chemistry of Co(II)-Bleomycin: Its Investigation Through uc(Nmr) and Molecular Dynamics. Biochemistry V. 39 3886 2000.
ISSN: ISSN 0006-2960
PubMed: 10747776
DOI: 10.1021/BI991841P
Page generated: Sun Jul 13 17:26:33 2025

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