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Cobalt in PDB 1j7k: Thermotoga Maritima Ruvb P216G Mutant

Protein crystallography data

The structure of Thermotoga Maritima Ruvb P216G Mutant, PDB code: 1j7k was solved by C.D.Putnam, S.B.Clancy, H.Tsuruta, J.G.Wetmur, J.A.Tainer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.65 / 1.80
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 86.217, 86.217, 82.142, 90.00, 90.00, 120.00
R / Rfree (%) 21.2 / 23.8

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Thermotoga Maritima Ruvb P216G Mutant (pdb code 1j7k). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Thermotoga Maritima Ruvb P216G Mutant, PDB code: 1j7k:

Cobalt binding site 1 out of 1 in 1j7k

Go back to Cobalt Binding Sites List in 1j7k
Cobalt binding site 1 out of 1 in the Thermotoga Maritima Ruvb P216G Mutant


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Thermotoga Maritima Ruvb P216G Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co705

b:38.4
occ:0.72
OXT A:ACT701 1.5 39.7 0.9
C A:ACT701 2.2 40.4 0.9
O A:HOH664 2.3 31.1 1.0
O A:ACT701 2.6 41.9 0.9
O A:HOH647 2.6 46.7 1.0
CH3 A:ACT701 3.4 38.2 0.9
N A:LEU279 4.2 19.8 1.0
O A:HOH514 4.4 36.2 1.0
CB A:LEU279 4.5 21.2 1.0
O A:HOH665 4.5 25.4 1.0
ND2 A:ASN280 4.7 31.6 1.0
CA A:GLY278 4.8 20.7 1.0
N A:ASN280 4.9 19.4 1.0
CA A:LEU279 4.9 19.7 1.0

Reference:

C.D.Putnam, S.B.Clancy, H.Tsuruta, S.Gonzalez, J.G.Wetmur, J.A.Tainer. Structure and Mechanism of the Ruvb Holliday Junction Branch Migration Motor. J.Mol.Biol. V. 311 297 2001.
ISSN: ISSN 0022-2836
PubMed: 11478862
DOI: 10.1006/JMBI.2001.4852
Page generated: Sun Dec 13 10:35:14 2020

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