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Cobalt in PDB 1m77: Near Atomic Resolution Crystal Structure of An A-Dna Decamer D(Cccgatcggg): Cobalt Hexammine Interactions with A-Dna

Protein crystallography data

The structure of Near Atomic Resolution Crystal Structure of An A-Dna Decamer D(Cccgatcggg): Cobalt Hexammine Interactions with A-Dna, PDB code: 1m77 was solved by B.Ramakrishnan, C.Sekharudu, B.C.Pan, M.Sundaralingam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.25
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 44.300, 44.300, 24.800, 90.00, 90.00, 90.00
R / Rfree (%) 16.3 / 18.5

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Near Atomic Resolution Crystal Structure of An A-Dna Decamer D(Cccgatcggg): Cobalt Hexammine Interactions with A-Dna (pdb code 1m77). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Near Atomic Resolution Crystal Structure of An A-Dna Decamer D(Cccgatcggg): Cobalt Hexammine Interactions with A-Dna, PDB code: 1m77:

Cobalt binding site 1 out of 1 in 1m77

Go back to Cobalt Binding Sites List in 1m77
Cobalt binding site 1 out of 1 in the Near Atomic Resolution Crystal Structure of An A-Dna Decamer D(Cccgatcggg): Cobalt Hexammine Interactions with A-Dna


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Near Atomic Resolution Crystal Structure of An A-Dna Decamer D(Cccgatcggg): Cobalt Hexammine Interactions with A-Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:8.8
occ:1.00
CO A:NCO201 0.0 8.8 1.0
N2 A:NCO201 2.0 7.2 1.0
N1 A:NCO201 2.0 8.1 1.0
N3 A:NCO201 2.1 7.2 1.0
N6 A:NCO201 2.1 7.0 1.0
N5 A:NCO201 2.1 8.2 1.0
N4 A:NCO201 2.1 7.7 1.0
O A:HOH101 3.6 8.8 1.0
O A:HOH102 3.9 13.3 1.0
O A:HOH108 3.9 19.8 1.0
O A:HOH103 3.9 33.8 1.0
OP2 A:DG9 3.9 9.1 1.0
O A:HOH129 4.4 58.4 1.0
O A:HOH131 4.5 15.5 1.0

Reference:

B.Ramakrishnan, C.Sekharudu, B.Pan, M.Sundaralingam. Near-Atomic Resolution Crystal Structure of An A-Dna Decamer D(Cccgatcggg): Cobalt Hexammine Interaction with A-Dna. Acta Crystallogr.,Sect.D V. 59 67 2003.
ISSN: ISSN 0907-4449
PubMed: 12499541
DOI: 10.1107/S0907444902018917
Page generated: Sun Dec 13 10:35:24 2020

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