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Cobalt in PDB 1o55: Molecular Structure of Two Crystal Forms of Cyclic Triadenylic Acid at 1 Angstrom Resolution

Protein crystallography data

The structure of Molecular Structure of Two Crystal Forms of Cyclic Triadenylic Acid at 1 Angstrom Resolution, PDB code: 1o55 was solved by Y.G.Gao, H.Robinson, Y.Guan, Y.C.Liaw, J.H.Van Boom, G.A.Van Der Marel, A.H.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.04
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 22.637, 22.637, 44.581, 90.00, 90.00, 120.00
R / Rfree (%) 13.8 / n/a

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Molecular Structure of Two Crystal Forms of Cyclic Triadenylic Acid at 1 Angstrom Resolution (pdb code 1o55). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Molecular Structure of Two Crystal Forms of Cyclic Triadenylic Acid at 1 Angstrom Resolution, PDB code: 1o55:

Cobalt binding site 1 out of 1 in 1o55

Go back to Cobalt Binding Sites List in 1o55
Cobalt binding site 1 out of 1 in the Molecular Structure of Two Crystal Forms of Cyclic Triadenylic Acid at 1 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Molecular Structure of Two Crystal Forms of Cyclic Triadenylic Acid at 1 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Co8

b:15.6
occ:1.00
O B:HOH118 2.0 9.9 1.0
O B:HOH123 2.1 8.8 1.0
O A:HOH122 2.1 9.5 1.0
O B:HOH120 2.1 10.4 1.0
O A:HOH121 2.1 12.0 1.0
O B:HOH119 2.1 9.6 1.0
O B:HOH116 3.9 44.7 1.0
O A:HOH108 3.9 28.4 1.0
O B:HOH102 4.0 9.4 1.0
N7 B:DA5 4.3 8.4 1.0
N3 A:DA2 4.3 9.3 1.0
O3' A:DA2 4.3 9.0 1.0
OP1 B:DA5 4.4 8.8 1.0
OP2 B:DA5 4.5 9.0 1.0
O B:HOH111 4.7 21.4 0.5
C1' A:DA2 4.7 9.4 1.0
C8 B:DA5 4.9 8.4 1.0

Reference:

Y.G.Gao, H.Robinson, Y.Guan, Y.C.Liaw, J.H.Van Boom, G.A.Van Der Marel, A.H.Wang. Molecular Structure of Two Crystal Forms of Cyclic Triadenylic Acid at 1A Resolution. J.Biomol.Struct.Dyn. V. 16 69 1998.
ISSN: ISSN 0739-1102
PubMed: 9745896
Page generated: Tue Jul 30 14:29:35 2024

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