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Cobalt in PDB 1qrf: A Closer Look at the Active Site of Gamma-Carbonic Anhydrases: High Resolution Crystallographic Studies of the Carbonic Anhydrase From Methanosarcina Thermophila

Protein crystallography data

The structure of A Closer Look at the Active Site of Gamma-Carbonic Anhydrases: High Resolution Crystallographic Studies of the Carbonic Anhydrase From Methanosarcina Thermophila, PDB code: 1qrf was solved by T.M.Iverson, B.E.Alber, C.Kisker, J.G.Ferry, D.C.Rees, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.55
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 82.608, 82.608, 82.608, 90.00, 90.00, 90.00
R / Rfree (%) 20.5 / 22.9

Cobalt Binding Sites:

The binding sites of Cobalt atom in the A Closer Look at the Active Site of Gamma-Carbonic Anhydrases: High Resolution Crystallographic Studies of the Carbonic Anhydrase From Methanosarcina Thermophila (pdb code 1qrf). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the A Closer Look at the Active Site of Gamma-Carbonic Anhydrases: High Resolution Crystallographic Studies of the Carbonic Anhydrase From Methanosarcina Thermophila, PDB code: 1qrf:

Cobalt binding site 1 out of 1 in 1qrf

Go back to Cobalt Binding Sites List in 1qrf
Cobalt binding site 1 out of 1 in the A Closer Look at the Active Site of Gamma-Carbonic Anhydrases: High Resolution Crystallographic Studies of the Carbonic Anhydrase From Methanosarcina Thermophila


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of A Closer Look at the Active Site of Gamma-Carbonic Anhydrases: High Resolution Crystallographic Studies of the Carbonic Anhydrase From Methanosarcina Thermophila within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co214

b:12.4
occ:1.00
ND1 A:HIS81 2.1 12.0 1.0
NE2 A:HIS122 2.1 13.0 1.0
O A:HOH300 2.3 26.7 1.0
O4 A:SO4215 2.4 18.9 0.4
O3 A:SO4215 2.7 22.4 0.4
S A:SO4215 3.0 22.4 0.4
CE1 A:HIS81 3.1 10.8 1.0
CE1 A:HIS122 3.1 13.0 1.0
CD2 A:HIS122 3.1 11.5 1.0
CG A:HIS81 3.2 10.4 1.0
O2 A:SO4215 3.5 22.4 0.4
CB A:HIS81 3.7 8.3 1.0
ND1 A:HIS122 4.2 12.5 1.0
NE2 A:HIS81 4.2 12.1 1.0
CG A:HIS122 4.2 12.1 1.0
O1 A:SO4215 4.3 21.4 0.4
CD2 A:HIS81 4.3 10.6 1.0
N A:ALA82 4.4 11.6 1.0
OE1 A:GLU62 4.5 20.2 1.0
C A:HIS81 4.6 11.5 1.0
O A:ALA82 4.6 14.0 1.0
CA A:HIS81 4.8 9.5 1.0
C A:ALA82 4.8 14.2 1.0
CA A:ALA82 5.0 11.4 1.0

Reference:

T.M.Iverson, B.E.Alber, C.Kisker, J.G.Ferry, D.C.Rees. A Closer Look at the Active Site of Gamma-Class Carbonic Anhydrases: High-Resolution Crystallographic Studies of the Carbonic Anhydrase From Methanosarcina Thermophila. Biochemistry V. 39 9222 2000.
ISSN: ISSN 0006-2960
PubMed: 10924115
DOI: 10.1021/BI000204S
Page generated: Sun Jul 13 17:42:57 2025

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