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Cobalt in PDB 1rxt: Crystal Structure of Human Myristoyl-Coa:Protein N- Myristoyltransferase.

Enzymatic activity of Crystal Structure of Human Myristoyl-Coa:Protein N- Myristoyltransferase.

All present enzymatic activity of Crystal Structure of Human Myristoyl-Coa:Protein N- Myristoyltransferase.:
2.3.1.97;

Protein crystallography data

The structure of Crystal Structure of Human Myristoyl-Coa:Protein N- Myristoyltransferase., PDB code: 1rxt was solved by J.Yang, Y.Wang, G.Frey, R.H.Abeles, G.A.Petsko, D.Ringe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 3.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 71.626, 116.425, 90.361, 90.00, 90.13, 90.00
R / Rfree (%) 28.3 / 39.1

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Human Myristoyl-Coa:Protein N- Myristoyltransferase. (pdb code 1rxt). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Human Myristoyl-Coa:Protein N- Myristoyltransferase., PDB code: 1rxt:

Cobalt binding site 1 out of 1 in 1rxt

Go back to Cobalt Binding Sites List in 1rxt
Cobalt binding site 1 out of 1 in the Crystal Structure of Human Myristoyl-Coa:Protein N- Myristoyltransferase.


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Human Myristoyl-Coa:Protein N- Myristoyltransferase. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Co990

b:61.5
occ:1.00
CE2 C:PHE326 2.8 40.5 1.0
CB C:TYR352 3.0 35.6 1.0
CE2 C:PHE298 3.3 91.3 1.0
CZ C:PHE326 3.4 58.6 1.0
CD1 C:LEU276 3.5 40.3 1.0
CG2 C:VAL354 3.5 31.8 1.0
CD2 C:PHE326 3.7 44.0 1.0
CD2 C:LEU276 3.9 8.6 1.0
C C:TYR352 3.9 35.1 1.0
CG C:TYR352 3.9 41.2 1.0
N C:ASN353 3.9 20.7 1.0
CA C:TYR352 4.1 22.4 1.0
CD2 C:PHE298 4.1 94.1 1.0
CG C:LEU276 4.1 25.4 1.0
CZ C:PHE298 4.2 84.6 1.0
CD1 C:TYR352 4.2 12.0 1.0
CB C:VAL354 4.3 33.5 1.0
N C:VAL354 4.3 48.2 1.0
O C:TYR352 4.4 50.6 1.0
CB C:LEU276 4.4 22.0 1.0
CA C:ASN353 4.5 21.7 1.0
C C:ASN353 4.6 36.4 1.0
CE1 C:PHE326 4.6 31.6 1.0
CG C:PHE326 4.9 41.8 1.0
CA C:VAL354 4.9 48.8 1.0
N C:TYR352 5.0 8.6 1.0

Reference:

J.Yang, Y.Wang, G.Frey, R.H.Abeles, G.A.Petsko, D.Ringe. Crystal Structure of Human Myristoyl-Coa:Protein N-Myristoyltransferase To Be Published.
Page generated: Sun Dec 13 10:36:02 2020

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