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Cobalt in PDB 1s23: Crystal Structure Analysis of the B-Dna Decamer Cgcaattgcg

Protein crystallography data

The structure of Crystal Structure Analysis of the B-Dna Decamer Cgcaattgcg, PDB code: 1s23 was solved by N.Valls, G.Wright, R.A.Steiner, G.N.Murshudov, J.A.Subirana, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.59 / 1.60
Space group I 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 26.220, 44.359, 52.336, 90.00, 90.00, 90.00
R / Rfree (%) 21 / 28.2

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure Analysis of the B-Dna Decamer Cgcaattgcg (pdb code 1s23). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure Analysis of the B-Dna Decamer Cgcaattgcg, PDB code: 1s23:

Cobalt binding site 1 out of 1 in 1s23

Go back to Cobalt Binding Sites List in 1s23
Cobalt binding site 1 out of 1 in the Crystal Structure Analysis of the B-Dna Decamer Cgcaattgcg


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure Analysis of the B-Dna Decamer Cgcaattgcg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co300

b:23.5
occ:0.50
O A:HOH325 1.9 34.0 1.0
O A:HOH324 2.0 38.2 1.0
N7 A:DG10 2.2 20.8 1.0
C8 A:DG10 3.0 23.9 1.0
C5 A:DG10 3.3 22.7 1.0
O6 A:DG10 3.8 26.8 1.0
C6 A:DG10 3.9 24.9 1.0
O A:HOH326 4.0 26.3 0.5
OP2 A:DG10 4.1 25.3 1.0
N9 A:DG10 4.3 21.1 1.0
O A:HOH323 4.4 31.4 0.5
C4 A:DG10 4.4 22.1 1.0
O A:HOH327 4.7 38.2 1.0

Reference:

N.Valls, G.Wright, R.A.Steiner, G.N.Murshudov, J.A.Subirana. Dna Variability in Five Crystal Structures of D(Cgcaattgcg). Acta Crystallogr.,Sect.D V. 60 680 2004.
ISSN: ISSN 0907-4449
PubMed: 15039556
DOI: 10.1107/S0907444904002896
Page generated: Sun Dec 13 10:36:04 2020

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