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Cobalt in PDB 1uc4: Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol
Enzymatic activity of Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol
All present enzymatic activity of Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol:
4.2.1.28;
4.2.1.28;
Protein crystallography data
The structure of Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol, PDB code: 1uc4
was solved by
N.Shibata,
Y.Nakanishi,
M.Fukuoka,
M.Yamanishi,
N.Yasuoka,
T.Toraya,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 36.92 / 1.80 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 73.830, 121.950, 208.240, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 19.5 / 23 |
Other elements in 1uc4:
The structure of Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol also contains other interesting chemical elements:
| Potassium | (K) | 2 atoms |
Cobalt Binding Sites:
The binding sites of Cobalt atom in the Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol
(pdb code 1uc4). This binding sites where shown within
5.0 Angstroms radius around Cobalt atom.
In total 2 binding sites of Cobalt where determined in the Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol, PDB code: 1uc4:
Jump to Cobalt binding site number: 1; 2;
In total 2 binding sites of Cobalt where determined in the Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol, PDB code: 1uc4:
Jump to Cobalt binding site number: 1; 2;
Cobalt binding site 1 out of 2 in 1uc4
Go back to
Cobalt Binding Sites List in 1uc4
Cobalt binding site 1 out
of 2 in the Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 1 of Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol within 5.0Å range:
|
Cobalt binding site 2 out of 2 in 1uc4
Go back to
Cobalt Binding Sites List in 1uc4
Cobalt binding site 2 out
of 2 in the Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 2 of Structure of Diol Dehydratase Complexed with (S)-1,2- Propanediol within 5.0Å range:
|
Reference:
N.Shibata,
Y.Nakanishi,
M.Fukuoka,
M.Yamanishi,
N.Yasuoka,
T.Toraya.
Structural Rationalization For the Lack of Stereospecificity in Coenzyme B12-Dependent Diol Dehydratase J.Biol.Chem. V. 278 22717 2003.
ISSN: ISSN 0021-9258
PubMed: 12684496
DOI: 10.1074/JBC.M301513200
Page generated: Tue Jul 30 14:39:56 2024
ISSN: ISSN 0021-9258
PubMed: 12684496
DOI: 10.1074/JBC.M301513200
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