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Cobalt in PDB 1zjg: 13MER-Co

Protein crystallography data

The structure of 13MER-Co, PDB code: 1zjg was solved by J.A.Dohm, M.H.Hsu, J.R.Hwu, R.C.Huang, E.N.Moudrianakis, E.E.Lattman, A.G.Gittis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 3.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.873, 43.291, 47.255, 90.00, 90.00, 90.00
R / Rfree (%) 22.3 / 26

Cobalt Binding Sites:

The binding sites of Cobalt atom in the 13MER-Co (pdb code 1zjg). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the 13MER-Co, PDB code: 1zjg:

Cobalt binding site 1 out of 1 in 1zjg

Go back to Cobalt Binding Sites List in 1zjg
Cobalt binding site 1 out of 1 in the 13MER-Co


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of 13MER-Co within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:49.7
occ:0.50
CO A:NCO201 0.0 49.7 0.5
N4 A:NCO201 2.0 48.2 0.5
N5 A:NCO201 2.0 47.6 0.5
N3 A:NCO201 2.0 48.3 0.5
N2 A:NCO201 2.0 48.4 0.5
N6 A:NCO201 2.0 48.3 0.5
N1 A:NCO201 2.0 48.9 0.5
O6 A:DG5 4.3 45.6 1.0
N7 A:DG4 4.4 34.8 1.0
O6 A:DG4 4.6 37.0 1.0
N7 A:DG5 4.8 43.2 1.0

Reference:

J.A.Dohm, M.H.Hsu, J.R.Hwu, R.C.Huang, E.N.Moudrianakis, E.E.Lattman, A.G.Gittis. Influence of Ions, Hydration, and the Transcriptional Inhibitor P4N on the Conformations of the SP1 Binding Site. J.Mol.Biol. V. 349 731 2005.
ISSN: ISSN 0022-2836
PubMed: 15896803
DOI: 10.1016/J.JMB.2005.04.001
Page generated: Tue Jul 30 14:55:06 2024

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