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Cobalt in PDB 2djx: Crystal Structure of Native Trypanosoma Cruzi Dihydroorotate Dehydrogenase

Enzymatic activity of Crystal Structure of Native Trypanosoma Cruzi Dihydroorotate Dehydrogenase

All present enzymatic activity of Crystal Structure of Native Trypanosoma Cruzi Dihydroorotate Dehydrogenase:
1.3.3.1;

Protein crystallography data

The structure of Crystal Structure of Native Trypanosoma Cruzi Dihydroorotate Dehydrogenase, PDB code: 2djx was solved by D.K.Inaoka, H.Shimizu, K.Sakamoto, T.Shiba, G.Kurisu, T.Nara, T.Aoki, S.Harada, K.Kita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.44 / 1.58
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 69.959, 73.128, 126.087, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 20.4

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Native Trypanosoma Cruzi Dihydroorotate Dehydrogenase (pdb code 2djx). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Native Trypanosoma Cruzi Dihydroorotate Dehydrogenase, PDB code: 2djx:

Cobalt binding site 1 out of 1 in 2djx

Go back to Cobalt Binding Sites List in 2djx
Cobalt binding site 1 out of 1 in the Crystal Structure of Native Trypanosoma Cruzi Dihydroorotate Dehydrogenase


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Native Trypanosoma Cruzi Dihydroorotate Dehydrogenase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co1351

b:11.3
occ:1.00
CO A:NCO1351 0.0 11.3 1.0
N3 A:NCO1351 2.0 12.6 1.0
N1 A:NCO1351 2.0 12.3 1.0
N2 A:NCO1351 2.0 12.6 1.0
N6 A:NCO1351 2.0 12.8 1.0
N5 A:NCO1351 2.0 12.2 1.0
N4 A:NCO1351 2.0 12.4 1.0
O A:GLN275 3.9 10.0 1.0
O A:HOH1534 4.1 15.5 1.0
O A:GLU276 4.1 10.6 1.0
O A:HOH1549 4.3 18.9 1.0
O A:HOH1544 4.3 18.1 1.0
O A:HOH1378 4.4 16.5 1.0
O A:HOH1421 4.4 27.7 1.0
O A:HOH1643 4.4 26.3 1.0
C A:GLU276 4.9 10.9 1.0

Reference:

D.K.Inaoka, H.Shimizu, K.Sakamoto, T.Shiba, G.Kurisu, T.Nara, T.Aoki, S.Harada, K.Kita. Crystal Structure of Native Trypanosoma Cruzi Dihydroorotate Dehydrogenase To Be Published.
Page generated: Sun Jul 13 18:08:03 2025

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