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Cobalt in PDB 2e6f: Crystal Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Oxonate

Enzymatic activity of Crystal Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Oxonate

All present enzymatic activity of Crystal Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Oxonate:
1.3.3.1;

Protein crystallography data

The structure of Crystal Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Oxonate, PDB code: 2e6f was solved by D.K.Inaoka, H.Shimizu, K.Sakamoto, T.Shiba, G.Kurisu, T.Nara, T.Aoki, S.Harada, K.Kita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.91 / 1.26
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 68.359, 71.828, 123.639, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 18

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Oxonate (pdb code 2e6f). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Oxonate, PDB code: 2e6f:

Cobalt binding site 1 out of 1 in 2e6f

Go back to Cobalt Binding Sites List in 2e6f
Cobalt binding site 1 out of 1 in the Crystal Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Oxonate


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Oxonate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co1351

b:7.5
occ:1.00
 CO A:NCO1351 0.0 7.5 1.0
N6 A:NCO1351 2.0 7.8 1.0
N4 A:NCO1351 2.0 7.5 1.0
N3 A:NCO1351 2.0 7.7 1.0
N2 A:NCO1351 2.0 7.9 1.0
N5 A:NCO1351 2.0 7.4 1.0
N1 A:NCO1351 2.0 6.8 1.0
O A:GLN275 3.8 6.7 1.0
O A:HOH1366 3.9 11.1 1.0
O A:GLU276 4.1 6.7 1.0
O A:HOH1548 4.1 17.1 1.0
O A:HOH1695 4.2 19.3 1.0
O A:HOH1549 4.3 22.5 1.0
O A:HOH1566 4.3 25.5 1.0
O A:HOH1456 4.3 11.2 1.0
C A:GLU276 4.8 6.3 1.0
C A:GLN275 5.0 6.2 1.0

Reference:

D.K.Inaoka, H.Shimizu, K.Sakamoto, T.Shiba, G.Kurisu, T.Nara, T.Aoki, S.Harada, K.Kita. Crystal Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Oxonate To Be Published.
Page generated: Tue Jul 30 15:04:58 2024

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