Cobalt in PDB 2i7e: Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine.

The binding sites of Cobalt atom in the Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine. (pdb code 2i7e). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total 4 binding sites of Cobalt where determined in the Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine., PDB code: 2i7e:
Jump to Cobalt binding site number: 1; 2; 3; 4;

Cobalt binding site 1 out of 4 in the Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine.


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine. within 5.0Å range: probe atom residue distance (Å) B Occ A:Co101 b:0.0 occ:1.00 CO A:NCO101 0.0 0.0 1.0 N4 A:NCO101 1.9 0.0 1.0 N5 A:NCO101 1.9 0.0 1.0 N6 A:NCO101 1.9 0.0 1.0 N3 A:NCO101 1.9 0.0 1.0 N2 A:NCO101 1.9 0.0 1.0 N1 A:NCO101 2.0 0.0 1.0 HN43 A:NCO101 2.5 0.0 1.0 HN42 A:NCO101 2.5 0.0 1.0 HN41 A:NCO101 2.5 0.0 1.0 HN51 A:NCO101 2.5 0.0 1.0 HN52 A:NCO101 2.5 0.0 1.0 HN53 A:NCO101 2.5 0.0 1.0 HN62 A:NCO101 2.5 0.0 1.0 HN61 A:NCO101 2.5 0.0 1.0 HN63 A:NCO101 2.5 0.0 1.0 HN32 A:NCO101 2.5 0.0 1.0 HN31 A:NCO101 2.5 0.0 1.0 HN33 A:NCO101 2.5 0.0 1.0 HN23 A:NCO101 2.5 0.0 1.0 HN21 A:NCO101 2.5 0.0 1.0 HN22 A:NCO101 2.5 0.0 1.0 HN13 A:NCO101 2.5 0.0 1.0 HN11 A:NCO101 2.5 0.0 1.0 HN12 A:NCO101 2.5 0.0 1.0 O6 A:G18 4.0 0.0 1.0 H42 A:C24 4.1 0.0 1.0 O4 A:U25 4.1 0.0 1.0 O6 A:G19 4.3 0.0 1.0 H41 A:C24 4.4 0.0 1.0 N4 A:C24 4.6 0.0 1.0 O6 A:G20 4.8 0.0 1.0 H3 A:U25 4.8 0.0 1.0 H1 A:G20 4.8 0.0 1.0 N7 A:G18 4.9 0.0 1.0 C6 A:G18 4.9 0.0 1.0

Cobalt binding site 2 out of 4 in the Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine.


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine. within 5.0Å range: probe atom residue distance (Å) B Occ A:Co102 b:0.0 occ:1.00 CO A:NCO102 0.0 0.0 1.0 N4 A:NCO102 1.9 0.0 1.0 N5 A:NCO102 1.9 0.0 1.0 N6 A:NCO102 1.9 0.0 1.0 N3 A:NCO102 1.9 0.0 1.0 N2 A:NCO102 1.9 0.0 1.0 N1 A:NCO102 2.0 0.0 1.0 HN43 A:NCO102 2.5 0.0 1.0 HN42 A:NCO102 2.5 0.0 1.0 HN41 A:NCO102 2.5 0.0 1.0 HN51 A:NCO102 2.5 0.0 1.0 HN52 A:NCO102 2.5 0.0 1.0 HN53 A:NCO102 2.5 0.0 1.0 HN63 A:NCO102 2.5 0.0 1.0 HN61 A:NCO102 2.5 0.0 1.0 HN62 A:NCO102 2.5 0.0 1.0 HN31 A:NCO102 2.5 0.0 1.0 HN32 A:NCO102 2.5 0.0 1.0 HN33 A:NCO102 2.5 0.0 1.0 HN23 A:NCO102 2.5 0.0 1.0 HN21 A:NCO102 2.5 0.0 1.0 HN22 A:NCO102 2.5 0.0 1.0 HN13 A:NCO102 2.5 0.0 1.0 HN11 A:NCO102 2.5 0.0 1.0 HN12 A:NCO102 2.5 0.0 1.0 H62 A:A10 3.5 0.0 1.0 H61 A:A10 4.1 0.0 1.0 N6 A:A10 4.2 0.0 1.0 OP2 A:U7 4.3 0.0 1.0 O5' A:U7 4.3 0.0 1.0 O6 A:G9 4.5 0.0 1.0 H5'' A:U7 4.8 0.0 1.0 P A:U7 5.0 0.0 1.0

Cobalt binding site 3 out of 4 in the Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine.


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 3 of Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine. within 5.0Å range: probe atom residue distance (Å) B Occ B:Co103 b:0.0 occ:1.00 CO B:NCO103 0.0 0.0 1.0 N4 B:NCO103 1.9 0.0 1.0 N5 B:NCO103 1.9 0.0 1.0 N6 B:NCO103 1.9 0.0 1.0 N3 B:NCO103 1.9 0.0 1.0 N2 B:NCO103 1.9 0.0 1.0 N1 B:NCO103 2.0 0.0 1.0 HN43 B:NCO103 2.5 0.0 1.0 HN41 B:NCO103 2.5 0.0 1.0 HN42 B:NCO103 2.5 0.0 1.0 HN52 B:NCO103 2.5 0.0 1.0 HN51 B:NCO103 2.5 0.0 1.0 HN53 B:NCO103 2.5 0.0 1.0 HN63 B:NCO103 2.5 0.0 1.0 HN62 B:NCO103 2.5 0.0 1.0 HN61 B:NCO103 2.5 0.0 1.0 HN31 B:NCO103 2.5 0.0 1.0 HN32 B:NCO103 2.5 0.0 1.0 HN33 B:NCO103 2.5 0.0 1.0 HN23 B:NCO103 2.5 0.0 1.0 HN21 B:NCO103 2.5 0.0 1.0 HN22 B:NCO103 2.5 0.0 1.0 HN11 B:NCO103 2.5 0.0 1.0 HN12 B:NCO103 2.5 0.0 1.0 HN13 B:NCO103 2.5 0.0 1.0 O6 B:G61 4.1 0.0 1.0 N7 B:G61 4.5 0.0 1.0 O6 B:G62 4.6 0.0 1.0 O4 B:U68 4.6 0.0 1.0 H42 B:C67 4.7 0.0 1.0 N7 B:G60 4.9 0.0 1.0 C6 B:G61 5.0 0.0 1.0

Cobalt binding site 4 out of 4 in the Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine.


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 4 of Gaaa Tetralooop Receptor Complex with Associated Cobalt Hexammine. within 5.0Å range: probe atom residue distance (Å) B Occ B:Co104 b:0.0 occ:1.00 CO B:NCO104 0.0 0.0 1.0 N4 B:NCO104 1.9 0.0 1.0 N5 B:NCO104 1.9 0.0 1.0 N6 B:NCO104 1.9 0.0 1.0 N3 B:NCO104 1.9 0.0 1.0 N2 B:NCO104 1.9 0.0 1.0 N1 B:NCO104 2.0 0.0 1.0 HN43 B:NCO104 2.5 0.0 1.0 HN42 B:NCO104 2.5 0.0 1.0 HN41 B:NCO104 2.5 0.0 1.0 HN51 B:NCO104 2.5 0.0 1.0 HN52 B:NCO104 2.5 0.0 1.0 HN53 B:NCO104 2.5 0.0 1.0 HN61 B:NCO104 2.5 0.0 1.0 HN62 B:NCO104 2.5 0.0 1.0 HN63 B:NCO104 2.5 0.0 1.0 HN32 B:NCO104 2.5 0.0 1.0 HN33 B:NCO104 2.5 0.0 1.0 HN31 B:NCO104 2.5 0.0 1.0 HN22 B:NCO104 2.5 0.0 1.0 HN23 B:NCO104 2.5 0.0 1.0 HN21 B:NCO104 2.5 0.0 1.0 HN13 B:NCO104 2.5 0.0 1.0 HN11 B:NCO104 2.5 0.0 1.0 HN12 B:NCO104 2.5 0.0 1.0 H62 B:A53 3.6 0.0 1.0 H61 B:A53 4.0 0.0 1.0 O6 B:G52 4.1 0.0 1.0 N6 B:A53 4.2 0.0 1.0 HO2' B:A49 4.5 0.0 1.0 O4 B:U76 4.5 0.0 1.0 H41 B:C77 4.8 0.0 1.0 C6 B:G52 5.0 0.0 1.0

J.H.Davis, T.R.Foster, M.Tonelli, S.E.Butcher. Role of Metal Ions in the Tetraloop-Receptor Complex As Analyzed By uc(Nmr). Rna V. 13 76 2007.
ISSN: ISSN 1355-8382
PubMed: 17119098
DOI: 10.1261/RNA.268307