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Cobalt in PDB 2xk1: Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor
Enzymatic activity of Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor
All present enzymatic activity of Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor:
3.4.16.4;
3.4.16.4;
Protein crystallography data
The structure of Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor, PDB code: 2xk1
was solved by
E.Sauvage,
R.Herman,
F.Kerff,
M.Rocaboy,
P.Charlier,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 27.53 / 2.80 |
| Space group | C 1 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 154.898, 92.348, 143.829, 90.00, 92.25, 90.00 |
| R / Rfree (%) | 21.7 / 26.4 |
Cobalt Binding Sites:
The binding sites of Cobalt atom in the Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor
(pdb code 2xk1). This binding sites where shown within
5.0 Angstroms radius around Cobalt atom.
In total 4 binding sites of Cobalt where determined in the Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor, PDB code: 2xk1:
Jump to Cobalt binding site number: 1; 2; 3; 4;
In total 4 binding sites of Cobalt where determined in the Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor, PDB code: 2xk1:
Jump to Cobalt binding site number: 1; 2; 3; 4;
Cobalt binding site 1 out of 4 in 2xk1
Go back to
Cobalt Binding Sites List in 2xk1
Cobalt binding site 1 out
of 4 in the Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 1 of Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor within 5.0Å range:
|
Cobalt binding site 2 out of 4 in 2xk1
Go back to
Cobalt Binding Sites List in 2xk1
Cobalt binding site 2 out
of 4 in the Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 2 of Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor within 5.0Å range:
|
Cobalt binding site 3 out of 4 in 2xk1
Go back to
Cobalt Binding Sites List in 2xk1
Cobalt binding site 3 out
of 4 in the Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 3 of Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor within 5.0Å range:
|
Cobalt binding site 4 out of 4 in 2xk1
Go back to
Cobalt Binding Sites List in 2xk1
Cobalt binding site 4 out
of 4 in the Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cobalt with other atoms in the Co binding
site number 4 of Crystal Structure of A Complex Between Actinomadura R39 Dd- Peptidase and A Boronate Inhibitor within 5.0Å range:
|
Reference:
E.C.Y.Woon,
A.Zervosen,
E.Sauvage,
K.J.Simmons,
M.Ivec,
S.R.Inglis,
C.W.G.Fishwick,
S.Gobec,
P.Charlier,
A.Luxen,
C.J.Schofield.
Structure Guided Development of Potent Reversibly Binding Penicillin Binding Protein Inhibitors Acs Med.Chem.Lett. V. 2 219 2011.
ISSN: ISSN 1948-5875
PubMed: 24900305
DOI: 10.1021/ML100260X
Page generated: Tue Jul 30 15:34:57 2024
ISSN: ISSN 1948-5875
PubMed: 24900305
DOI: 10.1021/ML100260X
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