Cobalt in PDB 2xph: Crystal Structure of Human SENP1 with the Bound Cobalt

The structure of Crystal Structure of Human SENP1 with the Bound Cobalt, PDB code: 2xph was solved by V.Rimsa, T.Eadsforth, R.T.Hay, W.N.Hunter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	66.66 / 2.40
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	71.172, 71.172, 199.988, 90.00, 90.00, 120.00
R / Rfree (%)	22.702 / 31.339

The binding sites of Cobalt atom in the Crystal Structure of Human SENP1 with the Bound Cobalt (pdb code 2xph). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Human SENP1 with the Bound Cobalt, PDB code: 2xph:

Cobalt binding site 1 out of 1 in the Crystal Structure of Human SENP1 with the Bound Cobalt


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Human SENP1 with the Bound Cobalt within 5.0Å range: probe atom residue distance (Å) B Occ B:Co1646 b:16.4 occ:0.50 OE1 B:GLU430 1.8 20.8 1.0 NE2 B:HIS640 2.2 49.0 1.0 CD B:GLU430 2.6 27.2 1.0 OE2 B:GLU430 2.7 30.8 1.0 CE1 B:HIS640 3.2 35.2 1.0 CD2 B:HIS640 3.2 40.2 1.0 CG B:GLU430 4.0 31.4 1.0 ND1 B:HIS640 4.2 34.3 1.0 CG B:HIS640 4.3 41.6 1.0 NE1 B:TRP636 4.4 37.3 1.0 CZ2 B:TRP636 4.7 33.0 1.0 CE2 B:TRP636 4.8 36.1 1.0

V.Rimsa, T.Eadsforth, R.T.Hay, W.N.Hunter. The Role of CO2+ in the Crystallization of Human SENP1 and Comments on the Limitations of Automated Refinement Protocols Acta Crystallogr.,Sect.F V. 67 442 2011.
ISSN: ISSN 1744-3091
PubMed: 21505236
DOI: 10.1107/S1744309111005835