Atomistry » Cobalt » PDB 2xwq-3bbi » 3az6
Atomistry »
  Cobalt »
    PDB 2xwq-3bbi »
      3az6 »

Cobalt in PDB 3az6: Crystal Structure of Co/T-Hewl

Enzymatic activity of Crystal Structure of Co/T-Hewl

All present enzymatic activity of Crystal Structure of Co/T-Hewl:
3.2.1.17;

Protein crystallography data

The structure of Crystal Structure of Co/T-Hewl, PDB code: 3az6 was solved by S.Abe, M.Tsujimoto, K.Yoneda, M.Ohba, T.Hikage, M.Takano, S.Kitagawa, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.76 / 1.50
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.702, 78.702, 36.730, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 22.2

Other elements in 3az6:

The structure of Crystal Structure of Co/T-Hewl also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms
Sodium (Na) 1 atom

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Co/T-Hewl (pdb code 3az6). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Co/T-Hewl, PDB code: 3az6:

Cobalt binding site 1 out of 1 in 3az6

Go back to Cobalt Binding Sites List in 3az6
Cobalt binding site 1 out of 1 in the Crystal Structure of Co/T-Hewl


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Co/T-Hewl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co130

b:18.0
occ:1.00
OD2 A:ASP52 2.0 16.1 1.0
O A:HOH166 2.1 21.1 1.0
O A:HOH163 2.1 20.5 1.0
O A:HOH182 2.1 19.3 1.0
O A:HOH161 2.2 17.9 1.0
O A:HOH156 2.3 21.4 1.0
CG A:ASP52 3.1 15.5 1.0
OD1 A:ASP52 3.5 14.7 1.0
O A:HOH184 3.9 22.6 1.0
O A:HOH160 4.0 20.7 1.0
O A:GLN57 4.1 15.9 1.0
OD1 A:ASN46 4.2 19.5 1.0
OE1 A:GLU35 4.3 19.7 1.0
O A:HOH217 4.3 35.8 1.0
OE2 A:GLU35 4.3 21.6 1.0
CB A:ASP52 4.3 14.1 1.0
O A:HOH192 4.4 23.9 1.0
O A:HOH220 4.4 33.2 1.0
O A:HOH236 4.5 45.5 1.0
CB A:GLN57 4.6 14.8 1.0
O A:HOH216 4.6 29.2 1.0
O A:HOH231 4.7 37.0 1.0
CD A:GLU35 4.7 17.1 1.0
CG A:ASN46 5.0 17.0 1.0

Reference:

S.Abe, M.Tsujimoto, K.Yoneda, M.Ohba, T.Hikage, M.Takano, S.Kitagawa, T.Ueno. Porous Protein Crystals As Reaction Vessels For Controlling Magnetic Properties of Nanoparticles Small V. 8 1314 2012.
ISSN: ISSN 1613-6810
PubMed: 22383363
DOI: 10.1002/SMLL.201101866
Page generated: Sun Dec 13 10:39:50 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy