Cobalt in PDB 3kol: Crystal Structure of A Glyoxalase/Dioxygenase From Nostoc Punctiforme

The structure of Crystal Structure of A Glyoxalase/Dioxygenase From Nostoc Punctiforme, PDB code: 3kol was solved by S.Eswaramoorthy, S.Swaminathan, S.K.Burley, New York Sgxresearch Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.90
Space group	P 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	50.382, 50.382, 138.026, 90.00, 90.00, 90.00
R / Rfree (%)	21.3 / 23.4

The binding sites of Cobalt atom in the Crystal Structure of A Glyoxalase/Dioxygenase From Nostoc Punctiforme (pdb code 3kol). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total 2 binding sites of Cobalt where determined in the Crystal Structure of A Glyoxalase/Dioxygenase From Nostoc Punctiforme, PDB code: 3kol:
Jump to Cobalt binding site number: 1; 2;

Cobalt binding site 1 out of 2 in the Crystal Structure of A Glyoxalase/Dioxygenase From Nostoc Punctiforme


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of A Glyoxalase/Dioxygenase From Nostoc Punctiforme within 5.0Å range: probe atom residue distance (Å) B Occ A:Co301 b:11.2 occ:0.50 O A:HOH237 2.0 22.2 1.0 NE2 A:HIS44 2.1 16.0 1.0 O A:HOH183 2.1 17.2 1.0 CD2 A:HIS44 3.1 14.6 1.0 CE1 A:HIS44 3.1 16.6 1.0 O A:GLU45 4.1 14.0 1.0 OE2 A:GLU50 4.1 19.6 1.0 OE1 A:GLU50 4.1 17.2 1.0 ND1 A:HIS44 4.2 15.3 1.0 CG A:HIS44 4.2 15.0 1.0 O A:HOH197 4.4 22.9 1.0 O A:HOH224 4.5 31.7 1.0 CD A:GLU50 4.5 21.7 1.0

Cobalt binding site 2 out of 2 in the Crystal Structure of A Glyoxalase/Dioxygenase From Nostoc Punctiforme


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of Crystal Structure of A Glyoxalase/Dioxygenase From Nostoc Punctiforme within 5.0Å range: probe atom residue distance (Å) B Occ A:Co302 b:15.3 occ:1.00 O A:HOH238 2.0 25.4 1.0 NE2 A:HIS99 2.1 11.9 1.0 OE1 A:GLU147 2.1 14.1 1.0 O A:HOH181 2.2 15.3 1.0 O A:HOH239 2.2 12.1 1.0 CE1 A:HIS99 3.0 12.2 1.0 CD A:GLU147 3.1 14.2 1.0 CD2 A:HIS99 3.1 9.3 1.0 OE2 A:GLU147 3.5 13.8 1.0 OH A:TYR137 4.1 24.6 1.0 ND1 A:HIS99 4.1 10.9 1.0 CE1 A:TYR137 4.2 22.1 1.0 CG A:HIS99 4.2 9.0 1.0 CG A:GLU147 4.5 13.2 1.0 CB A:ALA101 4.5 12.2 1.0 O A:HOH255 4.5 43.3 1.0 O A:HOH203 4.5 28.8 1.0 CZ A:TYR137 4.6 22.0 1.0 CB A:GLU147 4.7 10.6 1.0

S.Eswaramoorthy, S.K.Burley, S.Swaminathan. Crystal Structure of A Glyoxalase/Dioxygenase From Nostoc Punctiforme To Be Published.