Cobalt in PDB 3kyo: Crystal Structure of Hla-G Presenting Klpaqfyil Peptide

The structure of Crystal Structure of Hla-G Presenting Klpaqfyil Peptide, PDB code: 3kyo was solved by N.G.Walpole, J.Rossjohn, C.S.Clements, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.00 / 1.70
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	58.606, 85.982, 111.570, 90.00, 95.61, 90.00
R / Rfree (%)	18.2 / 22.6

The binding sites of Cobalt atom in the Crystal Structure of Hla-G Presenting Klpaqfyil Peptide (pdb code 3kyo). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total 2 binding sites of Cobalt where determined in the Crystal Structure of Hla-G Presenting Klpaqfyil Peptide, PDB code: 3kyo:
Jump to Cobalt binding site number: 1; 2;

Cobalt binding site 1 out of 2 in the Crystal Structure of Hla-G Presenting Klpaqfyil Peptide


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Hla-G Presenting Klpaqfyil Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Co100 b:86.5 occ:1.00 NE2 B:HIS51 2.2 34.5 1.0 O B:HOH968 2.3 48.5 1.0 O B:HOH969 2.8 63.7 1.0 O B:HOH993 2.9 52.0 1.0 CE1 B:HIS51 3.2 36.6 1.0 CD2 B:HIS51 3.2 33.8 1.0 O B:HOH619 4.0 50.1 1.0 ND1 B:HIS51 4.3 33.2 1.0 CG B:HIS51 4.3 25.5 1.0

Cobalt binding site 2 out of 2 in the Crystal Structure of Hla-G Presenting Klpaqfyil Peptide


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of Crystal Structure of Hla-G Presenting Klpaqfyil Peptide within 5.0Å range: probe atom residue distance (Å) B Occ D:Co100 b:82.8 occ:1.00 NE2 D:HIS51 2.3 34.6 1.0 O D:HOH952 2.4 66.6 1.0 O C:HOH971 2.8 52.1 1.0 O D:HOH970 2.8 63.9 1.0 CE1 D:HIS51 3.2 36.4 1.0 CD2 D:HIS51 3.4 41.0 1.0 O D:HOH829 4.3 51.2 1.0 ND1 D:HIS51 4.3 28.9 1.0 CG D:HIS51 4.4 32.3 1.0 O C:HOH282 4.9 38.7 1.0

N.G.Walpole, L.Kjer-Nielsen, L.Kostenko, J.Mccluskey, A.G.Brooks, J.Rossjohn, C.S.Clements. The Structure and Stability of the Monomorphic Hla-G Are Influenced By the Nature of the Bound Peptide J.Mol.Biol. V. 397 467 2010.
ISSN: ISSN 0022-2836
PubMed: 20122941
DOI: 10.1016/J.JMB.2010.01.052