Chemical elements
  Cobalt
    Isotopes
    Energy
    Production
    Preparation
    Application
    Physical Properties
    Chemical Properties
    Compounds
    PDB 1a0c-1epy
    PDB 1et4-1k7y
    PDB 1k98-1r6x
    PDB 1r8k-1v9b
    PDB 1vl3-212d
    PDB 222d-2eff
    PDB 2ehd-2j3z
    PDB 2j4j-2r1p
    PDB 2r2s-331d
    PDB 362d-3fqw
    PDB 3ft6-3igy
    PDB 3igz-3o0n
      3igz
      3isq
      3iuh
      3iv9
      3iva
      3ivs
      3ivu
      3ixn
      3ka4
      3ka6
      3ka8
      3ka9
      3khb
      3khc
      3koi
      3kok
      3kol
      3kon
      3kow
      3kox
      3koy
      3koz
      3kp0
      3kp1
      3kq4
      3krg
      3krk
      3kyn
      3kyo
      3l0s
      3l48
      3lln
      3lmm
      3lqx
      3m4z
      3m59
      3m5a
      3m8d
      3mat
      3mcr
      3mgp
      3mgw
      3mr4
      3mz3
      3mz7
      3ngy
      3ngz
      3npq
      3nyk
      3o0n
    PDB 3o0o-4req
    PDB 4xim-9icb

Cobalt in the structure of Binding of Cobalt Ions to the Nucleosome Core Particle (pdb 3mgp)






The binding sites of Cobalt atom in the structure of Binding of Cobalt Ions to the Nucleosome Core Particle (pdb code 3mgp). This binding sites where shown with 5.0 Angstroms radius around Cobalt atom.
The 3mgp structure was solved by K.MOHIDEEN, R.MUHAMMAD, C.A.DAVEY, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)52.6-2.4
Space groupP212121
a (A)106.502
b (A)109.940
c (A)183.352
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)23.9
Rfree (%)28.2


Cobalt Binding Sites:

Cobalt binding site 1 out of 43 in 3mgp


Cobalt binding site 1 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 1 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: E: Glu73, E: Gln76, E: Asp77, F: Leu22,

conact list:


AtomAtomDistance (A)
CoO E:Glu734.70
CoCG E:Glu734.76
CoOE1 E:Gln764.16
CoCD E:Gln764.90
CoCG E:Gln764.97
CoN E:Asp774.72
CoCB E:Asp774.60
CoOD2 E:Asp773.61
CoOD1 E:Asp772.20
CoCG E:Asp773.25
CoCA E:Asp774.83
CoO F:Leu223.96

interactive model:


Cobalt binding site 2 out of 43 in 3mgp


Cobalt binding site 2 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 2 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dg-28, J: Da26, J: Dg27, J: Dc28,

conact list:


AtomAtomDistance (A)
CoC6 I:Dg-284.82
CoO6 I:Dg-283.75
CoC8 J:Da264.51
CoN7 J:Da264.66
CoN9 J:Dg274.20
CoC8 J:Dg273.08
CoC6 J:Dg273.33
CoN1 J:Dg274.71
CoC5 J:Dg272.93
CoN7 J:Dg272.02
CoC4 J:Dg274.14
CoO6 J:Dg273.05
CoN4 J:Dc284.71

interactive model:


Cobalt binding site 3 out of 43 in 3mgp


Cobalt binding site 3 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 3 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Da60, I: Dg61, I: Dg62,

conact list:


AtomAtomDistance (A)
CoN9 I:Da604.98
CoC8 I:Da604.08
CoC5 I:Da605.00
CoN7 I:Da604.08
CoN9 I:Dg614.56
CoC8 I:Dg613.28
CoC6 I:Dg614.18
CoC5 I:Dg613.61
CoN7 I:Dg612.47
CoC4 I:Dg614.72
CoO6 I:Dg613.95
CoO6 I:Dg624.52

interactive model:


Cobalt binding site 4 out of 43 in 3mgp


Cobalt binding site 4 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 4 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Da60, J: Dg61, J: Dg62,

conact list:


AtomAtomDistance (A)
CoN9 J:Da604.76
CoC8 J:Da603.97
CoC5 J:Da604.88
CoN7 J:Da604.04
CoC2' J:Da604.94
CoN9 J:Dg614.51
CoC8 J:Dg613.28
CoC6 J:Dg613.87
CoC5 J:Dg613.40
CoN7 J:Dg612.35
CoC4 J:Dg614.57
CoO6 J:Dg613.60
CoC6 J:Dg624.67
CoN7 J:Dg624.98
CoO6 J:Dg623.66

interactive model:


Cobalt binding site 5 out of 43 in 3mgp


Cobalt binding site 5 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 5 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt47, I: Dg48, I: Dg49,

conact list:


AtomAtomDistance (A)
CoC3' I:Dt474.59
CoC1' I:Dt474.81
CoO3' I:Dt474.73
CoC2' I:Dt473.67
CoN9 I:Dg484.09
CoC8 I:Dg482.88
CoC6 I:Dg483.52
CoN1 I:Dg484.90
CoC5 I:Dg482.97
CoN7 I:Dg481.90
CoC4 I:Dg484.12
CoOP2 I:Dg484.27
CoO6 I:Dg483.38
CoO6 I:Dg494.61

interactive model:


Cobalt binding site 6 out of 43 in 3mgp


Cobalt binding site 6 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 6 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Dt47, J: Dg48, J: Dg49,

conact list:


AtomAtomDistance (A)
CoC2' J:Dt474.16
CoN9 J:Dg484.31
CoC8 J:Dg483.10
CoC6 J:Dg483.82
CoC5 J:Dg483.28
CoN7 J:Dg482.21
CoC4 J:Dg484.39
CoOP2 J:Dg484.32
CoO6 J:Dg483.64
CoN7 J:Dg495.00
CoO6 J:Dg494.08

interactive model:


Cobalt binding site 7 out of 43 in 3mgp


Cobalt binding site 7 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 7 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Dt-4, J: Dg-3, J: Dg-2,

conact list:


AtomAtomDistance (A)
CoC3' J:Dt-44.99
CoO3' J:Dt-44.72
CoC2' J:Dt-44.29
CoN9 J:Dg-34.67
CoC8 J:Dg-33.37
CoC6 J:Dg-34.56
CoC5 J:Dg-33.93
CoN7 J:Dg-32.72
CoC4 J:Dg-34.96
CoOP2 J:Dg-34.38
CoO6 J:Dg-34.35
CoO6 J:Dg-24.56

interactive model:


Cobalt binding site 8 out of 43 in 3mgp


Cobalt binding site 8 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 8 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Da26, I: Dg27, I: Dc28, J: Dg-28,

conact list:


AtomAtomDistance (A)
CoN9 I:Da264.54
CoC8 I:Da263.75
CoC5 I:Da264.68
CoN7 I:Da263.84
CoOP2 I:Da264.99
CoC2' I:Da264.82
CoN9 I:Dg274.29
CoC8 I:Dg273.10
CoC6 I:Dg273.57
CoN1 I:Dg274.95
CoC5 I:Dg273.12
CoN7 I:Dg272.11
CoC4 I:Dg274.30
CoO6 I:Dg273.32
CoN4 I:Dc284.67
CoO6 J:Dg-284.52

interactive model:


Cobalt binding site 9 out of 43 in 3mgp


Cobalt binding site 9 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 9 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 9 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt-4, I: Dg-3, I: Dg-2,

conact list:


AtomAtomDistance (A)
CoC6 I:Dt-44.68
CoC5 I:Dt-44.93
CoC2' I:Dt-44.49
CoN9 I:Dg-34.30
CoC8 I:Dg-33.09
CoC6 I:Dg-33.90
CoC5 I:Dg-33.33
CoN7 I:Dg-32.26
CoC4 I:Dg-34.41
CoOP2 I:Dg-34.98
CoO6 I:Dg-33.75
CoO6 I:Dg-24.24

interactive model:


Cobalt binding site 10 out of 43 in 3mgp


Cobalt binding site 10 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 10 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 10 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: D: Glu102, D: His106,

conact list:


AtomAtomDistance (A)
CoOE1 D:Glu1023.91
CoOE2 D:Glu1022.34
CoCD D:Glu1023.36
CoCG D:Glu1024.50
CoNE2 D:His1062.49
CoND1 D:His1064.17
CoCD2 D:His1063.41
CoCE1 D:His1063.14
CoCG D:His1064.33

interactive model:


Cobalt binding site 11 out of 43 in 3mgp


Cobalt binding site 11 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 11 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 11 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dg5, J: Da-7, J: Dg-6, J: Dc-5,

conact list:


AtomAtomDistance (A)
CoO6 I:Dg54.37
CoC8 J:Da-74.90
CoN7 J:Da-74.92
CoN9 J:Dg-64.32
CoC8 J:Dg-63.07
CoC6 J:Dg-64.12
CoC5 J:Dg-63.48
CoN7 J:Dg-62.34
CoC4 J:Dg-64.52
CoO6 J:Dg-64.01
CoN4 J:Dc-54.54

interactive model:


Cobalt binding site 12 out of 43 in 3mgp


Cobalt binding site 12 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 12 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 12 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt-36, I: Dg-35, I: Dg-34, J: Dc34,

conact list:


AtomAtomDistance (A)
CoO3' I:Dt-364.57
CoC2' I:Dt-364.40
CoN9 I:Dg-354.08
CoC8 I:Dg-352.91
CoC6 I:Dg-353.52
CoN1 I:Dg-354.87
CoC5 I:Dg-352.98
CoN7 I:Dg-351.96
CoC4 I:Dg-354.12
CoOP2 I:Dg-354.38
CoO6 I:Dg-353.37
CoC6 I:Dg-343.27
CoN1 I:Dg-344.21
CoC5 I:Dg-343.81
CoN7 I:Dg-343.94
CoC4 I:Dg-344.94
CoO6 I:Dg-342.63
CoN4 J:Dc344.38

interactive model:


Cobalt binding site 13 out of 43 in 3mgp


Cobalt binding site 13 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 13 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 13 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt33, I: Dc34, J: Dt-36, J: Dg-35, J: Dg-34, J: Co88,

conact list:


AtomAtomDistance (A)
CoO4 I:Dt335.00
CoN4 I:Dc344.48
CoO3' J:Dt-364.83
CoC2' J:Dt-364.20
CoN9 J:Dg-354.42
CoC8 J:Dg-353.21
CoC6 J:Dg-354.17
CoC5 J:Dg-353.57
CoN7 J:Dg-352.49
CoC4 J:Dg-354.60
CoOP2 J:Dg-354.56
CoO6 J:Dg-354.02
CoC2 J:Dg-344.80
CoC6 J:Dg-342.79
CoN1 J:Dg-343.60
CoC5 J:Dg-343.67
CoN7 J:Dg-344.08
CoC4 J:Dg-344.81
CoO6 J:Dg-341.99
CoCO J:Co884.14

interactive model:


Cobalt binding site 14 out of 43 in 3mgp


Cobalt binding site 14 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 14 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 14 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: C: Lys36, F: Tyr88, H: His79,

conact list:


AtomAtomDistance (A)
CoNZ C:Lys364.61
CoOH F:Tyr884.85
CoNE2 H:His792.71
CoND1 H:His794.74
CoCD2 H:His792.93
CoCE1 H:His793.99
CoCG H:His794.26

interactive model:


Cobalt binding site 15 out of 43 in 3mgp


Cobalt binding site 15 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 15 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 15 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: H: Glu102, H: Lys105, H: His106,

conact list:


AtomAtomDistance (A)
CoOE2 H:Glu1023.98
CoNZ H:Lys1053.69
CoNE2 H:His1061.89
CoND1 H:His1063.89
CoCD2 H:His1063.04
CoCE1 H:His1062.72
CoCG H:His1064.07

interactive model:


Cobalt binding site 16 out of 43 in 3mgp


Cobalt binding site 16 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 16 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 16 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Dc28, J: Da29, J: Dg30,

conact list:


AtomAtomDistance (A)
CoC6 J:Dc284.57
CoC5 J:Dc284.73
CoC2' J:Dc284.95
CoN9 J:Da294.78
CoC8 J:Da293.56
CoC6 J:Da294.31
CoC5 J:Da293.78
CoN6 J:Da293.96
CoN7 J:Da292.74
CoC4 J:Da294.90
CoO6 J:Dg304.10

interactive model:


Cobalt binding site 17 out of 43 in 3mgp


Cobalt binding site 17 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 17 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 17 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Da-57, J: Dg-56,

conact list:


AtomAtomDistance (A)
CoN9 J:Da-574.92
CoC8 J:Da-574.09
CoN7 J:Da-574.17
CoN9 J:Dg-564.59
CoC8 J:Dg-563.26
CoC6 J:Dg-564.54
CoC5 J:Dg-563.87
CoN7 J:Dg-562.63
CoC4 J:Dg-564.88
CoO6 J:Dg-564.38

interactive model:


Cobalt binding site 18 out of 43 in 3mgp


Cobalt binding site 18 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 18 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 18 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt13, I: Dg14, I: Dc16, J: Dg-15, J: Dc-14, J: Da-13,

conact list:


AtomAtomDistance (A)
CoO2 I:Dt134.23
CoN9 I:Dg143.35
CoN3 I:Dg144.89
CoC8 I:Dg142.09
CoC6 I:Dg143.41
CoN1 I:Dg144.72
CoC5 I:Dg142.58
CoC1' I:Dg144.60
CoN7 I:Dg141.29
CoC4 I:Dg143.57
CoO6 I:Dg143.50
CoN3 I:Dc164.71
CoC2 I:Dc164.49
CoO2 I:Dc163.59
CoN3 J:Dg-154.34
CoN2 J:Dg-153.66
CoC2 J:Dg-153.99
CoN1 J:Dg-154.56
CoN3 J:Dc-144.24
CoC2 J:Dc-144.07
CoO2 J:Dc-143.17
CoN3 J:Da-133.86
CoC2 J:Da-133.74
CoN1 J:Da-134.65
CoC4 J:Da-134.90

interactive model:


Cobalt binding site 19 out of 43 in 3mgp


Cobalt binding site 19 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 19 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 19 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Da-57, I: Dg-56, I: Da-55,

conact list:


AtomAtomDistance (A)
CoN9 I:Da-574.68
CoC8 I:Da-574.05
CoC5 I:Da-574.74
CoN7 I:Da-574.09
CoN9 I:Dg-564.05
CoC8 I:Dg-562.80
CoC6 I:Dg-563.72
CoC5 I:Dg-563.08
CoN7 I:Dg-561.93
CoC4 I:Dg-564.19
CoO6 I:Dg-563.60
CoN6 I:Da-554.93

interactive model:


Cobalt binding site 20 out of 43 in 3mgp


Cobalt binding site 20 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 20 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 20 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Dt7, J: Dg8, J: Da9,

conact list:


AtomAtomDistance (A)
CoC2' J:Dt74.87
CoN9 J:Dg84.70
CoC8 J:Dg83.47
CoC6 J:Dg84.72
CoC5 J:Dg84.07
CoN7 J:Dg82.94
CoO6 J:Dg84.59
CoN6 J:Da94.68

interactive model:


Cobalt binding site 21 out of 43 in 3mgp


Cobalt binding site 21 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 21 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 21 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dg-6, J: Da4, J: Dg5,

conact list:


AtomAtomDistance (A)
CoO6 I:Dg-64.20
CoN9 J:Da44.98
CoC8 J:Da44.45
CoN7 J:Da44.79
CoC2' J:Da44.69
CoN9 J:Dg54.54
CoC8 J:Dg53.38
CoC6 J:Dg53.81
CoC5 J:Dg53.39
CoN7 J:Dg52.43
CoC4 J:Dg54.56
CoO6 J:Dg53.53

interactive model:


Cobalt binding site 22 out of 43 in 3mgp


Cobalt binding site 22 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 22 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 22 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Dt70, J: Dg71,

conact list:


AtomAtomDistance (A)
CoC3' J:Dt704.88
CoC6 J:Dt704.39
CoN1 J:Dt704.76
CoC5 J:Dt704.87
CoC1' J:Dt704.85
CoC2' J:Dt703.78
CoN9 J:Dg713.69
CoC8 J:Dg712.32
CoC6 J:Dg714.63
CoC5 J:Dg713.60
CoC1' J:Dg714.73
CoN7 J:Dg712.21
CoC4 J:Dg714.31
CoOP2 J:Dg714.54
CoC2' J:Dg714.75
CoO6 J:Dg714.80

interactive model:


Cobalt binding site 23 out of 43 in 3mgp


Cobalt binding site 23 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 23 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 23 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Da-53, J: Da51, J: Dg52, J: Dt53,

conact list:


AtomAtomDistance (A)
CoN6 I:Da-534.72
CoC8 J:Da514.61
CoN7 J:Da514.25
CoC8 J:Dg524.65
CoC6 J:Dg524.43
CoC5 J:Dg524.36
CoN7 J:Dg523.61
CoO6 J:Dg523.81
CoC4 J:Dt534.91
CoO4 J:Dt533.84

interactive model:


Cobalt binding site 24 out of 43 in 3mgp


Cobalt binding site 24 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 24 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 24 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt23, I: Dg24, I: Dg25, J: Dc-25,

conact list:


AtomAtomDistance (A)
CoC6 I:Dt234.67
CoC5 I:Dt234.69
CoC7 I:Dt234.80
CoN9 I:Dg244.62
CoC8 I:Dg243.51
CoC6 I:Dg243.59
CoN1 I:Dg244.95
CoC5 I:Dg243.29
CoN7 I:Dg242.46
CoC4 I:Dg244.52
CoO6 I:Dg243.24
CoC6 I:Dg253.26
CoN1 I:Dg254.22
CoC5 I:Dg253.96
CoN7 I:Dg254.12
CoO6 I:Dg252.41
CoC4 J:Dc-254.94
CoN4 J:Dc-253.82

interactive model:


Cobalt binding site 25 out of 43 in 3mgp


Cobalt binding site 25 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 25 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 25 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dg64, I: Dg65, I: Da66, I: Co86,

conact list:


AtomAtomDistance (A)
CoN9 I:Dg644.94
CoC8 I:Dg644.29
CoN7 I:Dg644.37
CoC2' I:Dg644.93
CoN9 I:Dg654.77
CoC8 I:Dg653.57
CoC6 I:Dg653.85
CoC5 I:Dg653.52
CoN7 I:Dg652.56
CoC4 I:Dg654.74
CoO6 I:Dg653.48
CoN6 I:Da664.50
CoCO I:Co863.03

interactive model:


Cobalt binding site 26 out of 43 in 3mgp


Cobalt binding site 26 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 26 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 26 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Da-32, J: Dt33, J: Dc34,

conact list:


AtomAtomDistance (A)
CoN3 I:Da-324.65
CoO2 J:Dt334.67
CoO4' J:Dc344.67
CoC5' J:Dc344.35
CoC4' J:Dc344.74

interactive model:


Cobalt binding site 27 out of 43 in 3mgp


Cobalt binding site 27 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 27 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 27 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dc-64, I: Da-63,

conact list:


AtomAtomDistance (A)
CoC2 I:Dc-644.91
CoC1' I:Dc-644.62
CoO2 I:Dc-643.78
CoO3' I:Dc-644.90
CoO4' I:Dc-644.51
CoC4' I:Dc-644.82
CoO4' I:Da-634.03
CoC5' I:Da-634.41
CoC4' I:Da-634.46

interactive model:


Cobalt binding site 28 out of 43 in 3mgp


Cobalt binding site 28 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 28 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 28 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: D: His79, H: Glu68,

conact list:


AtomAtomDistance (A)
CoNE2 D:His792.43
CoND1 D:His794.47
CoCD2 D:His792.87
CoCE1 D:His793.63
CoCG D:His794.14
CoOE2 H:Glu684.55

interactive model:


Cobalt binding site 29 out of 43 in 3mgp


Cobalt binding site 29 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 29 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 29 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: C: Glu61, C: Asp90, C: Glu92,

conact list:


AtomAtomDistance (A)
CoOE2 C:Glu614.62
CoCB C:Asp904.55
CoOD2 C:Asp903.19
CoOD1 C:Asp902.31
CoCG C:Asp903.11
CoCB C:Glu924.95

interactive model:


Cobalt binding site 30 out of 43 in 3mgp


Cobalt binding site 30 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 30 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 30 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt57, I: Dg58, J: Dg-59, J: Dc-58, I: Co84, I: Co87,

conact list:


AtomAtomDistance (A)
CoC5 I:Dt574.99
CoC7 I:Dt574.58
CoO6 I:Dg584.08
CoC8 J:Dg-594.79
CoC6 J:Dg-594.55
CoC5 J:Dg-594.50
CoN7 J:Dg-593.80
CoO6 J:Dg-593.94
CoC4 J:Dc-584.97
CoN4 J:Dc-583.73
CoCO I:Co843.77
CoCO I:Co874.18

interactive model:


Cobalt binding site 31 out of 43 in 3mgp


Cobalt binding site 31 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 31 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 31 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dg58, I: Dc59, J: Dt-60, J: Dg-59, J: Co87, I: Co87,

conact list:


AtomAtomDistance (A)
CoN7 I:Dg584.47
CoO6 I:Dg584.48
CoC4 I:Dc594.76
CoN4 I:Dc593.43
CoC5 J:Dt-604.37
CoC7 J:Dt-603.78
CoC4 J:Dt-604.75
CoO4 J:Dt-604.65
CoC6 J:Dg-594.86
CoO6 J:Dg-593.63
CoCO J:Co873.77
CoCO I:Co872.08

interactive model:


Cobalt binding site 32 out of 43 in 3mgp


Cobalt binding site 32 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 32 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 32 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt33, J: Dg-35, J: Dg-34, J: Da-33, J: Co79,

conact list:


AtomAtomDistance (A)
CoO4 I:Dt334.86
CoC8 J:Dg-354.79
CoC2' J:Dg-355.00
CoN9 J:Dg-343.71
CoN3 J:Dg-344.95
CoC8 J:Dg-342.58
CoC6 J:Dg-343.20
CoN1 J:Dg-344.53
CoC5 J:Dg-342.58
CoN7 J:Dg-341.58
CoC4 J:Dg-343.70
CoO6 J:Dg-343.17
CoN6 J:Da-334.97
CoCO J:Co794.14

interactive model:


Cobalt binding site 33 out of 43 in 3mgp


Cobalt binding site 33 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 33 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 33 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Dg64, J: Dg65,

conact list:


AtomAtomDistance (A)
CoC8 J:Dg644.22
CoC5 J:Dg644.61
CoN7 J:Dg643.55
CoOP2 J:Dg644.48
CoO6 J:Dg644.76
CoC6 J:Dg654.07
CoC5 J:Dg654.72
CoN7 J:Dg654.73
CoO6 J:Dg653.16

interactive model:


Cobalt binding site 34 out of 43 in 3mgp


Cobalt binding site 34 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 34 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 34 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Da29, I: Dg30,

conact list:


AtomAtomDistance (A)
CoN9 I:Da294.36
CoC8 I:Da293.13
CoC6 I:Da294.56
CoC5 I:Da293.78
CoN6 I:Da294.50
CoN7 I:Da292.62
CoC4 I:Da294.69
CoO6 I:Dg304.59

interactive model:


Cobalt binding site 35 out of 43 in 3mgp


Cobalt binding site 35 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 35 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 35 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt63, I: Dg64, I: Dg65, I: Co82,

conact list:


AtomAtomDistance (A)
CoC6 I:Dt634.99
CoC5 I:Dt634.83
CoN9 I:Dg644.53
CoC8 I:Dg643.29
CoC6 I:Dg644.64
CoC5 I:Dg643.94
CoN7 I:Dg642.79
CoC4 I:Dg644.86
CoOP2 I:Dg644.82
CoO6 I:Dg644.55
CoC6 I:Dg654.58
CoC5 I:Dg654.80
CoN7 I:Dg654.36
CoO6 I:Dg653.83
CoCO I:Co823.03

interactive model:


Cobalt binding site 36 out of 43 in 3mgp


Cobalt binding site 36 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 36 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 36 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt57, I: Dg58, I: Dc59, J: Dg-59, J: Co87, I: Co84,

conact list:


AtomAtomDistance (A)
CoC2' I:Dt574.06
CoC8 I:Dg584.92
CoC5 I:Dg584.92
CoN7 I:Dg583.98
CoO6 I:Dg584.53
CoN4 I:Dc594.50
CoO6 J:Dg-594.92
CoCO J:Co874.18
CoCO I:Co842.08

interactive model:


Cobalt binding site 37 out of 43 in 3mgp


Cobalt binding site 37 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 37 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 37 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt-26, J: Dg24, J: Dg25, J: Co102,

conact list:


AtomAtomDistance (A)
CoO4 I:Dt-264.85
CoN9 J:Dg244.89
CoC8 J:Dg244.24
CoC5 J:Dg244.99
CoN7 J:Dg244.32
CoOP2 J:Dg244.28
CoC5' J:Dg244.94
CoC2' J:Dg244.95
CoC8 J:Dg253.90
CoC6 J:Dg253.64
CoC5 J:Dg253.53
CoN7 J:Dg252.78
CoC4 J:Dg254.83
CoO6 J:Dg253.09
CoCO J:Co1024.03

interactive model:


Cobalt binding site 38 out of 43 in 3mgp


Cobalt binding site 38 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 38 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 38 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dg65, I: Da66, I: Dt67, J: Dc-65, J: Dc-64,

conact list:


AtomAtomDistance (A)
CoN2 I:Dg654.92
CoN3 I:Da664.52
CoC2 I:Da664.93
CoO4' I:Dt674.30
CoC5' I:Dt674.13
CoC4' I:Dt673.99
CoC1' J:Dc-654.55
CoO2 J:Dc-654.35
CoO4' J:Dc-644.24
CoC5' J:Dc-644.25
CoC4' J:Dc-644.45

interactive model:


Cobalt binding site 39 out of 43 in 3mgp


Cobalt binding site 39 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 39 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 39 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Dg-2, J: Da-1, J: Dt0,

conact list:


AtomAtomDistance (A)
CoC8 J:Dg-24.46
CoN7 J:Dg-24.65
CoC8 J:Da-14.06
CoC6 J:Da-14.49
CoC5 J:Da-14.12
CoN6 J:Da-13.92
CoN7 J:Da-13.13
CoC7 J:Dt04.30
CoO4 J:Dt04.37

interactive model:


Cobalt binding site 40 out of 43 in 3mgp


Cobalt binding site 40 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 40 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 40 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Dt70, I: Dg71, I: Da72,

conact list:


AtomAtomDistance (A)
CoN3 I:Dt704.96
CoC2 I:Dt704.93
CoC6 I:Dt704.19
CoN1 I:Dt704.51
CoC5 I:Dt704.29
CoC7 I:Dt704.68
CoC4 I:Dt704.72
CoC2' I:Dt704.54
CoN9 I:Dg713.34
CoN3 I:Dg714.77
CoC8 I:Dg712.15
CoC6 I:Dg713.25
CoN1 I:Dg714.55
CoC5 I:Dg712.43
CoC1' I:Dg714.69
CoN7 I:Dg711.23
CoC4 I:Dg713.46
CoO6 I:Dg713.39
CoN6 I:Da724.24
CoN7 I:Da724.74

interactive model:


Cobalt binding site 41 out of 43 in 3mgp


Cobalt binding site 41 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 41 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 41 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Da-70, J: Da-69,

conact list:


AtomAtomDistance (A)
CoC8 J:Da-704.44
CoN7 J:Da-704.10
CoN6 J:Da-694.58

interactive model:


Cobalt binding site 42 out of 43 in 3mgp


Cobalt binding site 42 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 42 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 42 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: I: Da-7, I: Dg-6, I: Dc-5, J: Dg5,

conact list:


AtomAtomDistance (A)
CoN9 I:Da-74.98
CoC8 I:Da-74.43
CoN7 I:Da-74.90
CoC2' I:Da-74.66
CoN9 I:Dg-64.13
CoC8 I:Dg-62.76
CoC6 I:Dg-64.68
CoC5 I:Dg-63.78
CoN7 I:Dg-62.42
CoC4 I:Dg-64.62
CoO6 I:Dg-64.74
CoN4 I:Dc-54.81
CoO6 J:Dg54.45

interactive model:


Cobalt binding site 43 out of 43 in 3mgp


Cobalt binding site 43 out of 43 in 3mgp
Click to enlarge
stereopicture of Cobalt binding site 43 out of 43 in 3mgp
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 43 of Cobalt in the PDB 3mgp. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cobalt atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: J: Dt23, J: Dg24, J: Dg25, J: Co90,

conact list:


AtomAtomDistance (A)
CoC3' J:Dt234.47
CoC2 J:Dt234.90
CoC6 J:Dt234.18
CoN1 J:Dt234.20
CoC5 J:Dt234.84
CoC1' J:Dt234.13
CoO3' J:Dt234.65
CoC2' J:Dt233.28
CoN9 J:Dg244.24
CoC8 J:Dg242.94
CoC6 J:Dg244.07
CoC5 J:Dg243.40
CoP J:Dg244.43
CoN7 J:Dg242.20
CoC4 J:Dg244.46
CoOP2 J:Dg243.13
CoO6 J:Dg243.95
CoC6 J:Dg254.59
CoO6 J:Dg253.73
CoCO J:Co904.03

interactive model:




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