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Cobalt in PDB 3nzh: Crystal Structure of Anti-Emmprin Antibody 5F6 Fab

Protein crystallography data

The structure of Crystal Structure of Anti-Emmprin Antibody 5F6 Fab, PDB code: 3nzh was solved by A.Teplyakov, G.Obmolova, T.Malia, G.L.Gilliland, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 96.530, 129.740, 42.390, 90.00, 109.52, 90.00
R / Rfree (%) 19.5 / 24.3

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Anti-Emmprin Antibody 5F6 Fab (pdb code 3nzh). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Anti-Emmprin Antibody 5F6 Fab, PDB code: 3nzh:

Cobalt binding site 1 out of 1 in 3nzh

Go back to Cobalt Binding Sites List in 3nzh
Cobalt binding site 1 out of 1 in the Crystal Structure of Anti-Emmprin Antibody 5F6 Fab


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Anti-Emmprin Antibody 5F6 Fab within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Co1001

b:34.8
occ:1.00
ND1 H:HIS224 2.2 34.1 1.0
ND1 H:HIS221 2.4 42.7 1.0
CE1 H:HIS224 3.1 36.3 1.0
CG H:HIS224 3.2 47.3 1.0
CG H:HIS221 3.2 47.0 1.0
CB H:HIS221 3.3 44.3 1.0
CE1 H:HIS221 3.5 46.1 1.0
CB H:HIS224 3.5 49.3 1.0
NE2 H:HIS224 4.2 45.8 1.0
CD2 H:HIS224 4.3 32.0 1.0
CA H:HIS221 4.4 46.9 1.0
CD2 H:HIS221 4.4 35.1 1.0
NE2 H:HIS221 4.6 55.3 1.0
O H:HIS221 4.6 47.2 1.0

Reference:

A.Teplyakov, G.Obmolova, T.Malia, G.L.Gilliland. Crystal Structure of Anti-Emmprin Antibody 5F6 Fab To Be Published.
Page generated: Sun Dec 13 10:41:40 2020

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