Atomistry » Cobalt » PDB 3mdl-3r61 » 3qq7
Atomistry »
  Cobalt »
    PDB 3mdl-3r61 »
      3qq7 »

Cobalt in PDB 3qq7: Crystal Structure of the P97 N-Terminal Domain

Protein crystallography data

The structure of Crystal Structure of the P97 N-Terminal Domain, PDB code: 3qq7 was solved by P.Haenzelmann, H.Schindelin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.28 / 2.65
Space group P 31
Cell size a, b, c (Å), α, β, γ (°) 60.560, 60.560, 63.110, 90.00, 90.00, 120.00
R / Rfree (%) 19.5 / 23.6

Other elements in 3qq7:

The structure of Crystal Structure of the P97 N-Terminal Domain also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of the P97 N-Terminal Domain (pdb code 3qq7). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of the P97 N-Terminal Domain, PDB code: 3qq7:

Cobalt binding site 1 out of 1 in 3qq7

Go back to Cobalt Binding Sites List in 3qq7
Cobalt binding site 1 out of 1 in the Crystal Structure of the P97 N-Terminal Domain


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of the P97 N-Terminal Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co402

b:0.3
occ:1.00
ND1 A:HIS183 2.4 82.1 0.5
ND1 A:HIS183 2.5 76.6 0.5
NH2 A:ARG113 2.7 0.5 1.0
CE1 A:HIS183 3.1 83.6 0.5
CE1 A:HIS183 3.4 79.1 0.5
CG A:HIS183 3.4 77.4 0.5
CL A:CL403 3.5 83.9 1.0
CG A:HIS183 3.6 74.6 0.5
CB A:HIS183 3.9 72.6 0.5
CB A:HIS183 3.9 72.0 0.5
CZ A:ARG113 4.0 0.1 1.0
NE2 A:HIS183 4.2 79.7 0.5
CD2 A:HIS183 4.4 78.3 0.5
NE2 A:HIS183 4.5 77.2 0.5
NH1 A:ARG113 4.6 0.8 1.0
CD2 A:HIS183 4.7 75.6 0.5
NE A:ARG113 5.0 0.2 1.0

Reference:

P.Hanzelmann, A.Buchberger, H.Schindelin. Hierarchical Binding of Cofactors to the Aaa Atpase P97. Structure V. 19 833 2011.
ISSN: ISSN 0969-2126
PubMed: 21645854
DOI: 10.1016/J.STR.2011.03.018
Page generated: Sun Dec 13 10:41:55 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy