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Cobalt in PDB 3tr3: Structure of A Bola Protein Homologue From Coxiella Burnetii

Protein crystallography data

The structure of Structure of A Bola Protein Homologue From Coxiella Burnetii, PDB code: 3tr3 was solved by J.Cheung, M.C.Franklin, M.Rudolph, M.Cassidy, E.Gary, F.Burshteyn, J.Love, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.13 / 2.46
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 66.245, 66.245, 118.009, 90.00, 90.00, 120.00
R / Rfree (%) 18.6 / 22

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Structure of A Bola Protein Homologue From Coxiella Burnetii (pdb code 3tr3). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total 2 binding sites of Cobalt where determined in the Structure of A Bola Protein Homologue From Coxiella Burnetii, PDB code: 3tr3:
Jump to Cobalt binding site number: 1; 2;

Cobalt binding site 1 out of 2 in 3tr3

Go back to Cobalt Binding Sites List in 3tr3
Cobalt binding site 1 out of 2 in the Structure of A Bola Protein Homologue From Coxiella Burnetii


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Structure of A Bola Protein Homologue From Coxiella Burnetii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co80

b:33.2
occ:1.00
O A:HOH90 2.0 26.9 1.0
NE2 A:HIS64 2.2 34.1 1.0
O A:HOH97 2.2 38.1 1.0
O A:HOH86 2.2 30.8 1.0
NE2 A:HIS29 2.4 27.9 1.0
CE1 A:HIS64 3.0 31.3 1.0
CD2 A:HIS64 3.2 34.3 1.0
CD2 A:HIS29 3.2 28.1 1.0
CE1 A:HIS29 3.4 27.8 1.0
ND1 A:HIS64 4.2 31.8 1.0
CG A:HIS64 4.3 34.6 1.0
CG A:HIS29 4.4 33.5 1.0
ND1 A:HIS29 4.5 30.7 1.0

Cobalt binding site 2 out of 2 in 3tr3

Go back to Cobalt Binding Sites List in 3tr3
Cobalt binding site 2 out of 2 in the Structure of A Bola Protein Homologue From Coxiella Burnetii


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of Structure of A Bola Protein Homologue From Coxiella Burnetii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Co80

b:37.4
occ:1.00
NE2 B:HIS29 2.2 35.5 1.0
NE2 B:HIS64 2.2 37.1 1.0
O B:HOH87 2.7 39.0 1.0
O B:HOH86 3.0 40.6 1.0
CE1 B:HIS29 3.0 36.6 1.0
CE1 B:HIS64 3.1 30.7 1.0
CD2 B:HIS64 3.3 37.7 1.0
CD2 B:HIS29 3.3 31.5 1.0
ND1 B:HIS29 4.2 35.8 1.0
ND1 B:HIS64 4.3 32.4 1.0
CG B:HIS64 4.4 35.4 1.0
CG B:HIS29 4.4 35.4 1.0

Reference:

M.C.Franklin, J.Cheung, M.J.Rudolph, F.Burshteyn, M.Cassidy, E.Gary, B.Hillerich, Z.K.Yao, P.R.Carlier, M.Totrov, J.D.Love. Structural Genomics For Drug Design Against the Pathogen Coxiella Burnetii. Proteins V. 83 2124 2015.
ISSN: ISSN 0887-3585
PubMed: 26033498
DOI: 10.1002/PROT.24841
Page generated: Sun Dec 13 10:42:30 2020

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