Atomistry » Cobalt » PDB 3urb-3w71 » 3w2l
Atomistry »
  Cobalt »
    PDB 3urb-3w71 »
      3w2l »

Cobalt in PDB 3w2l: Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-169

Enzymatic activity of Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-169

All present enzymatic activity of Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-169:
1.3.98.1;

Protein crystallography data

The structure of Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-169, PDB code: 3w2l was solved by D.K.Inaoka, M.Iida, T.Tabuchi, N.Lee, S.Matsuoka, T.Shiba, K.Sakamoto, S.Suzuki, E.O.Balogun, T.Nara, T.Aoki, M.Inoue, T.Honma, A.Tanaka, S.Harada, K.Kita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.67 / 1.64
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.943, 71.982, 129.273, 90.00, 90.00, 90.00
R / Rfree (%) 13.4 / 17

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-169 (pdb code 3w2l). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-169, PDB code: 3w2l:

Cobalt binding site 1 out of 1 in 3w2l

Go back to Cobalt Binding Sites List in 3w2l
Cobalt binding site 1 out of 1 in the Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-169


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-169 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co414

b:10.9
occ:1.00
CO A:NCO414 0.0 10.9 1.0
N3 A:NCO414 2.0 12.1 1.0
N5 A:NCO414 2.0 13.7 1.0
N4 A:NCO414 2.1 10.9 1.0
N2 A:NCO414 2.1 12.1 1.0
N1 A:NCO414 2.1 11.7 1.0
N6 A:NCO414 2.1 12.2 1.0
O A:GLN275 3.9 8.8 1.0
O A:HOH752 3.9 28.3 1.0
O A:GLU276 4.2 8.8 1.0
O A:HOH823 4.2 38.2 1.0
O A:HOH660 4.4 30.4 1.0
O A:HOH776 4.4 32.6 1.0
O A:HOH785 4.4 34.9 1.0
O A:HOH559 4.4 16.4 1.0
O A:HOH760 4.6 31.1 1.0
C A:GLU276 4.9 7.3 1.0

Reference:

D.K.Inaoka, M.Iida, T.Tabuchi, N.Lee, S.Matsuoka, T.Shiba, K.Sakamoto, S.Suzuki, E.O.Balogun, T.Nara, T.Aoki, M.Inoue, T.Honma, A.Tanaka, S.Harada, K.Kita. Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-169 To Be Published.
Page generated: Sun Dec 13 10:43:05 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy