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Cobalt in PDB 3w2u: Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-193

Enzymatic activity of Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-193

All present enzymatic activity of Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-193:
1.3.98.1;

Protein crystallography data

The structure of Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-193, PDB code: 3w2u was solved by D.K.Inaoka, M.Iida, T.Tabuchi, N.Lee, S.Matsuoka, T.Shiba, K.Sakamoto, S.Suzuki, E.O.Balogun, T.Nara, T.Aoki, M.Inoue, T.Honma, A.Tanaka, S.Harada, K.Kita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.51 / 2.25
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 68.215, 71.669, 129.671, 90.00, 90.00, 90.00
R / Rfree (%) 20.5 / 27

Other elements in 3w2u:

The structure of Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-193 also contains other interesting chemical elements:

Fluorine (F) 12 atoms

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-193 (pdb code 3w2u). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-193, PDB code: 3w2u:

Cobalt binding site 1 out of 1 in 3w2u

Go back to Cobalt Binding Sites List in 3w2u
Cobalt binding site 1 out of 1 in the Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-193


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-193 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co415

b:12.2
occ:1.00
CO A:NCO415 0.0 12.2 1.0
N1 A:NCO415 1.9 10.4 1.0
N2 A:NCO415 2.0 12.1 1.0
N3 A:NCO415 2.0 11.7 1.0
N4 A:NCO415 2.0 11.4 1.0
N6 A:NCO415 2.0 12.2 1.0
N5 A:NCO415 2.1 10.3 1.0
O A:GLN275 3.9 10.3 1.0
O A:GLU276 4.0 9.7 1.0
O A:HOH632 4.2 25.7 1.0
O A:HOH553 4.3 30.2 1.0
O A:HOH572 4.5 38.5 1.0
C A:GLU276 4.9 10.7 1.0

Reference:

D.K.Inaoka, M.Iida, T.Tabuchi, N.Lee, S.Matsuoka, T.Shiba, K.Sakamoto, S.Suzuki, E.O.Balogun, T.Nara, T.Aoki, M.Inoue, T.Honma, A.Tanaka, S.Harada, K.Kita. Structure of Trypanosoma Cruzi Dihydroorotate Dehydrogenase in Complex with Mii-3-193 To Be Published.
Page generated: Tue Jul 30 16:51:12 2024

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