Atomistry » Cobalt » PDB 4as7-4fck » 4d5v
Atomistry »
  Cobalt »
    PDB 4as7-4fck »
      4d5v »

Cobalt in PDB 4d5v: Hypocrea Jecorina Cellobiohydrolase CEL7A E217Q Soaked with Xylotetraose.

Enzymatic activity of Hypocrea Jecorina Cellobiohydrolase CEL7A E217Q Soaked with Xylotetraose.

All present enzymatic activity of Hypocrea Jecorina Cellobiohydrolase CEL7A E217Q Soaked with Xylotetraose.:
3.2.1.176;

Protein crystallography data

The structure of Hypocrea Jecorina Cellobiohydrolase CEL7A E217Q Soaked with Xylotetraose., PDB code: 4d5v was solved by M.H.Momeni, J.Stahlberg, H.Hansson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 66.59 / 1.62
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 83.210, 83.360, 110.690, 90.00, 90.00, 90.00
R / Rfree (%) 14.704 / 17.852

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Hypocrea Jecorina Cellobiohydrolase CEL7A E217Q Soaked with Xylotetraose. (pdb code 4d5v). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Hypocrea Jecorina Cellobiohydrolase CEL7A E217Q Soaked with Xylotetraose., PDB code: 4d5v:

Cobalt binding site 1 out of 1 in 4d5v

Go back to Cobalt Binding Sites List in 4d5v
Cobalt binding site 1 out of 1 in the Hypocrea Jecorina Cellobiohydrolase CEL7A E217Q Soaked with Xylotetraose.


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Hypocrea Jecorina Cellobiohydrolase CEL7A E217Q Soaked with Xylotetraose. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co1435

b:17.3
occ:0.50
OE2 A:GLU325 2.3 7.3 1.0
OE2 A:GLU295 2.4 11.1 0.8
OE1 A:GLU295 2.5 11.2 1.0
O A:HOH2408 2.7 42.2 0.5
CD A:GLU295 2.8 10.8 0.8
CD A:GLU325 3.2 8.0 1.0
OE1 A:GLU325 3.5 8.2 1.0
ND2 A:ASN301 4.2 10.5 1.0
CG A:GLU295 4.3 10.5 1.0
O A:HOH2417 4.5 17.5 1.0
CG A:GLU325 4.6 7.6 1.0
CB A:ALA299 4.7 6.6 1.0
OG A:SER297 4.7 9.6 1.0

Reference:

M.Haddad Momeni, W.Ubhayasekera, M.Sandgren, J.Stahlberg, H.Hansson. Structural Insights Into the Inhibition of Cellobiohydrolase CEL7A By Xylooligosaccharides. Febs J. 2015.
ISSN: ESSN 1742-4658
PubMed: 25765184
DOI: 10.1111/FEBS.13265
Page generated: Sun Dec 13 10:44:01 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy