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Cobalt in PDB 4k6r: Crystal Structure of Glmu in Complex with Atp

Enzymatic activity of Crystal Structure of Glmu in Complex with Atp

All present enzymatic activity of Crystal Structure of Glmu in Complex with Atp:
2.3.1.157; 2.7.7.23;

Protein crystallography data

The structure of Crystal Structure of Glmu in Complex with Atp, PDB code: 4k6r was solved by N.Vithani, B.Prakash, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.82 / 1.98
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 76.280, 76.280, 277.230, 90.00, 90.00, 120.00
R / Rfree (%) 15.9 / 20.1

Other elements in 4k6r:

The structure of Crystal Structure of Glmu in Complex with Atp also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Glmu in Complex with Atp (pdb code 4k6r). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Glmu in Complex with Atp, PDB code: 4k6r:

Cobalt binding site 1 out of 1 in 4k6r

Go back to Cobalt Binding Sites List in 4k6r
Cobalt binding site 1 out of 1 in the Crystal Structure of Glmu in Complex with Atp


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Glmu in Complex with Atp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co506

b:29.2
occ:0.33
O A:HOH962 2.0 26.4 0.3
OD2 A:ASP417 2.2 27.2 1.0
OD1 A:ASP417 2.9 23.6 1.0
CG A:ASP417 2.9 26.6 1.0
MG A:MG507 3.5 16.9 0.3
O A:HOH998 3.6 43.7 1.0
O A:HOH683 3.7 34.3 1.0
CB A:ASP417 4.3 23.0 1.0
O A:ASP417 4.6 23.0 1.0
O A:HOH607 4.9 23.8 1.0

Reference:

N.Vithani, V.Bais, B.Prakash. Glmu (N-Acetylglucosamine-1-Phosphate Uridyltransferase) Bound to Three Magnesium Ions and Atp at the Active Site Acta Crystallogr.,Sect.F V. 70 703 2014.
ISSN: ESSN 1744-3091
DOI: 10.1107/S2053230X14008279
Page generated: Sun Dec 13 10:44:57 2020

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