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Cobalt in PDB 4l8o: Crystal Structure of A Bile-Acid 7-Alpha Dehydratase (CLOHYLEM_06634) From Clostridium Hylemonae Dsm 15053 at 2.20 A Resolution

Enzymatic activity of Crystal Structure of A Bile-Acid 7-Alpha Dehydratase (CLOHYLEM_06634) From Clostridium Hylemonae Dsm 15053 at 2.20 A Resolution

All present enzymatic activity of Crystal Structure of A Bile-Acid 7-Alpha Dehydratase (CLOHYLEM_06634) From Clostridium Hylemonae Dsm 15053 at 2.20 A Resolution:
4.2.1.106;

Protein crystallography data

The structure of Crystal Structure of A Bile-Acid 7-Alpha Dehydratase (CLOHYLEM_06634) From Clostridium Hylemonae Dsm 15053 at 2.20 A Resolution, PDB code: 4l8o was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.57 / 2.20
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 52.956, 52.956, 428.627, 90.00, 90.00, 120.00
R / Rfree (%) 19.4 / 22.5

Other elements in 4l8o:

The structure of Crystal Structure of A Bile-Acid 7-Alpha Dehydratase (CLOHYLEM_06634) From Clostridium Hylemonae Dsm 15053 at 2.20 A Resolution also contains other interesting chemical elements:

Sodium (Na) 1 atom

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of A Bile-Acid 7-Alpha Dehydratase (CLOHYLEM_06634) From Clostridium Hylemonae Dsm 15053 at 2.20 A Resolution (pdb code 4l8o). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of A Bile-Acid 7-Alpha Dehydratase (CLOHYLEM_06634) From Clostridium Hylemonae Dsm 15053 at 2.20 A Resolution, PDB code: 4l8o:

Cobalt binding site 1 out of 1 in 4l8o

Go back to Cobalt Binding Sites List in 4l8o
Cobalt binding site 1 out of 1 in the Crystal Structure of A Bile-Acid 7-Alpha Dehydratase (CLOHYLEM_06634) From Clostridium Hylemonae Dsm 15053 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of A Bile-Acid 7-Alpha Dehydratase (CLOHYLEM_06634) From Clostridium Hylemonae Dsm 15053 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:21.2
occ:0.33
O A:HOH301 2.2 15.7 1.0
NE2 A:HIS86 2.3 15.8 1.0
CE1 A:HIS86 3.2 14.6 1.0
CD2 A:HIS86 3.3 14.9 1.0
ND1 A:HIS86 4.4 16.7 1.0
OE1 A:GLU105 4.4 21.1 1.0
CG A:HIS86 4.5 14.8 1.0
CB A:MET84 4.6 17.6 1.0
SD A:MET84 4.7 19.5 1.0
NA A:NA202 4.9 26.9 0.3

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sun Dec 13 10:45:08 2020

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