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Cobalt in PDB 4n7q: Crystal Structure of Eukaryotic Thic From A. Thaliana

Enzymatic activity of Crystal Structure of Eukaryotic Thic From A. Thaliana

All present enzymatic activity of Crystal Structure of Eukaryotic Thic From A. Thaliana:
4.1.99.17;

Protein crystallography data

The structure of Crystal Structure of Eukaryotic Thic From A. Thaliana, PDB code: 4n7q was solved by S.C.Coquille, C.Roux, A.Mehta, T.P.Begley, T.B.Fitzpatrick, S.Thore, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.03 / 1.60
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 107.000, 107.000, 88.300, 90.00, 90.00, 120.00
R / Rfree (%) 15.2 / 17.6

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Eukaryotic Thic From A. Thaliana (pdb code 4n7q). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Eukaryotic Thic From A. Thaliana, PDB code: 4n7q:

Cobalt binding site 1 out of 1 in 4n7q

Go back to Cobalt Binding Sites List in 4n7q
Cobalt binding site 1 out of 1 in the Crystal Structure of Eukaryotic Thic From A. Thaliana


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Eukaryotic Thic From A. Thaliana within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co704

b:12.2
occ:1.00
O A:HOH806 2.1 17.3 1.0
O A:HOH807 2.1 17.4 1.0
NE2 A:HIS426 2.2 13.1 1.0
NE2 A:HIS490 2.2 14.0 0.8
O A:HOH805 2.2 19.4 1.0
O A:HOH1491 2.8 18.8 1.0
CE1 A:HIS426 3.1 12.2 0.9
CE1 A:HIS490 3.2 11.7 0.9
CD2 A:HIS490 3.2 13.7 1.0
CD2 A:HIS426 3.2 11.4 1.0
O A:HOH1455 3.9 43.5 1.0
OE2 A:GLU489 4.1 20.6 0.8
O A:GLY388 4.2 11.9 1.0
ND1 A:HIS426 4.3 12.4 1.0
ND1 A:HIS490 4.3 11.7 0.9
CG A:HIS490 4.3 11.2 0.9
CG A:HIS426 4.3 11.6 1.0
O A:HOH903 4.5 23.4 1.0
CA A:GLY388 4.7 9.8 1.0
C A:GLY388 4.8 8.0 0.9
CD2 A:LEU454 5.0 19.1 1.0

Reference:

S.Coquille, C.Roux, A.Mehta, T.P.Begley, T.B.Fitzpatrick, S.Thore. High-Resolution Crystal Structure of the Eukaryotic Hmp-P Synthase (Thic) From Arabidopsis Thaliana. J.Struct.Biol. V. 184 438 2013.
ISSN: ISSN 1047-8477
PubMed: 24161603
DOI: 10.1016/J.JSB.2013.10.005
Page generated: Sun Dec 13 10:45:15 2020

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