Cobalt in PDB 4nnc: Ternary Complex of Obca with C4-Coa Adduct and Oxalate

The structure of Ternary Complex of Obca with C4-Coa Adduct and Oxalate, PDB code: 4nnc was solved by J.T.Oh, E.Goo, I.Hwang, S.Rhee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.12 / 2.28
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	174.634, 174.634, 46.057, 90.00, 90.00, 90.00
R / Rfree (%)	20.2 / 23.5

The binding sites of Cobalt atom in the Ternary Complex of Obca with C4-Coa Adduct and Oxalate (pdb code 4nnc). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Ternary Complex of Obca with C4-Coa Adduct and Oxalate, PDB code: 4nnc:

Cobalt binding site 1 out of 1 in the Ternary Complex of Obca with C4-Coa Adduct and Oxalate


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Ternary Complex of Obca with C4-Coa Adduct and Oxalate within 5.0Å range: probe atom residue distance (Å) B Occ A:Co601 b:21.8 occ:1.00 O51 A:2KQ603 1.7 28.5 1.0 NE2 A:HIS224 2.0 23.0 1.0 OE1 A:GLU473 2.2 23.6 1.0 NE2 A:HIS222 2.2 21.4 1.0 O54 A:2KQ603 2.2 23.5 1.0 O4 A:OXL602 2.8 36.9 1.0 CE1 A:HIS224 3.0 21.2 1.0 C49 A:2KQ603 3.0 28.5 1.0 CD2 A:HIS224 3.0 19.5 1.0 CD A:GLU473 3.1 23.9 1.0 CD2 A:HIS222 3.1 20.4 1.0 OE2 A:GLU473 3.2 20.6 1.0 CE1 A:HIS222 3.2 24.8 1.0 C53 A:2KQ603 3.2 29.3 1.0 C52 A:2KQ603 3.6 33.5 1.0 C50 A:2KQ603 3.8 34.5 1.0 OG A:SER275 4.0 21.5 1.0 C2 A:OXL602 4.0 39.8 1.0 ND1 A:HIS224 4.1 20.0 1.0 O A:HOH844 4.1 27.1 1.0 CG A:HIS224 4.2 20.9 1.0 CB A:SER275 4.2 17.8 1.0 C47 A:2KQ603 4.2 38.2 1.0 NH2 A:ARG469 4.2 24.9 1.0 S48 A:2KQ603 4.3 51.8 1.0 CG A:HIS222 4.3 22.6 1.0 NH1 A:ARG469 4.3 21.3 1.0 ND1 A:HIS222 4.3 21.8 1.0 O55 A:2KQ603 4.4 27.5 1.0 CG A:GLU473 4.5 22.3 1.0 CZ A:ARG469 4.7 22.4 1.0 C1 A:OXL602 4.8 35.8 1.0 O2 A:OXL602 4.9 46.3 1.0 CA A:GLY12 4.9 21.1 1.0

J.Oh, E.Goo, I.Hwang, S.Rhee. Structural Basis For Bacterial Quorum Sensing-Mediated Oxalogenesis. J.Biol.Chem. V. 289 11465 2014.
ISSN: ISSN 0021-9258
PubMed: 24616091
DOI: 10.1074/JBC.M113.543462