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Cobalt in PDB 4x19: Crystal Structure of Native 4-Ot From Pseudomonas Putida Mt-2 at 1.94 Angstrom

Enzymatic activity of Crystal Structure of Native 4-Ot From Pseudomonas Putida Mt-2 at 1.94 Angstrom

All present enzymatic activity of Crystal Structure of Native 4-Ot From Pseudomonas Putida Mt-2 at 1.94 Angstrom:
5.3.2.6;

Protein crystallography data

The structure of Crystal Structure of Native 4-Ot From Pseudomonas Putida Mt-2 at 1.94 Angstrom, PDB code: 4x19 was solved by A.M.W.H.Thunnissen, H.Poddar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.70 / 1.94
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.480, 88.816, 169.877, 90.00, 94.51, 90.00
R / Rfree (%) 24.8 / 28.9

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Native 4-Ot From Pseudomonas Putida Mt-2 at 1.94 Angstrom (pdb code 4x19). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Native 4-Ot From Pseudomonas Putida Mt-2 at 1.94 Angstrom, PDB code: 4x19:

Cobalt binding site 1 out of 1 in 4x19

Go back to Cobalt Binding Sites List in 4x19
Cobalt binding site 1 out of 1 in the Crystal Structure of Native 4-Ot From Pseudomonas Putida Mt-2 at 1.94 Angstrom


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Native 4-Ot From Pseudomonas Putida Mt-2 at 1.94 Angstrom within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Co101

b:0.5
occ:1.00
CO F:NCO101 0.0 0.5 1.0
N4 F:NCO101 2.0 47.7 1.0
N3 F:NCO101 2.0 61.0 1.0
N1 F:NCO101 2.0 57.0 1.0
N5 F:NCO101 2.0 62.1 1.0
N6 F:NCO101 2.0 48.3 1.0
N2 F:NCO101 2.0 72.3 1.0
O F:ARG29 4.1 36.1 1.0
OD1 F:ASP32 4.1 42.6 1.0
OD2 F:ASP32 4.6 39.8 1.0
CG F:ASP32 4.8 39.4 1.0

Reference:

H.Poddar, M.Rahimi, E.M.Geertsema, A.M.Thunnissen, G.J.Poelarends. Evidence For the Formation of An Enamine Species During Aldol and Michael-Type Addition Reactions Promiscuously Catalyzed By 4-Oxalocrotonate Tautomerase. Chembiochem 2015.
ISSN: ESSN 1439-7633
PubMed: 25728471
DOI: 10.1002/CBIC.201402687
Page generated: Sun Dec 13 10:46:19 2020

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