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Cobalt in PDB 4ytv: Crystal Structure of MDM35

Protein crystallography data

The structure of Crystal Structure of MDM35, PDB code: 4ytv was solved by Y.Watanabe, Y.Tamura, S.Kawano, T.Endo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.57 / 1.45
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 59.144, 59.144, 123.277, 90.00, 90.00, 120.00
R / Rfree (%) 19.7 / 21.1

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of MDM35 (pdb code 4ytv). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of MDM35, PDB code: 4ytv:

Cobalt binding site 1 out of 1 in 4ytv

Go back to Cobalt Binding Sites List in 4ytv
Cobalt binding site 1 out of 1 in the Crystal Structure of MDM35


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of MDM35 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co102

b:80.1
occ:1.00
O A:GLY-2 2.3 47.4 1.0
N A:GLY-2 2.5 47.5 1.0
C A:GLY-2 3.1 47.7 1.0
CA A:GLY-2 3.2 47.5 1.0
N A:PRO-1 4.3 47.6 1.0

Reference:

Y.Watanabe, Y.Tamura, S.Kawano, T.Endo. Structural and Mechanistic Insights Into Phospholipid Transfer By UPS1-MDM35 in Mitochondria. Nat Commun V. 6 7922 2015.
ISSN: ESSN 2041-1723
PubMed: 26235513
DOI: 10.1038/NCOMMS8922
Page generated: Tue Jul 30 17:40:32 2024

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