Cobalt in PDB 5c6x: Crystal Structure of C-As Lyase with Co(II)

The structure of Crystal Structure of C-As Lyase with Co(II), PDB code: 5c6x was solved by S.Venkadesh, M.Yoshinaga, B.Sankaran, P.Kandavelu, B.P.Rosen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.50
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	42.420, 42.420, 117.610, 90.00, 90.00, 90.00
R / Rfree (%)	20.2 / 23.8

The structure of Crystal Structure of C-As Lyase with Co(II) also contains other interesting chemical elements:

Sodium

(Na)

2 atoms

The binding sites of Cobalt atom in the Crystal Structure of C-As Lyase with Co(II) (pdb code 5c6x). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of C-As Lyase with Co(II), PDB code: 5c6x:

Cobalt binding site 1 out of 1 in the Crystal Structure of C-As Lyase with Co(II)


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of C-As Lyase with Co(II) within 5.0Å range: probe atom residue distance (Å) B Occ A:Co201 b:17.6 occ:0.42 OE2 A:GLU117 1.9 27.5 1.0 O A:HOH365 2.1 33.8 1.0 NE2 A:GLN8 2.1 22.7 0.5 NE2 A:HIS65 2.2 21.5 1.0 O A:HOH329 2.2 27.3 1.0 OE1 A:GLN8 2.2 23.8 0.5 O A:HOH331 2.4 36.4 1.0 CE1 A:HIS65 3.0 22.1 1.0 CD A:GLN8 3.1 19.8 0.5 CD A:GLU117 3.1 30.3 1.0 CD A:GLN8 3.2 24.7 0.5 CD2 A:HIS65 3.2 20.0 1.0 NE2 A:GLN8 3.3 23.5 0.5 OE1 A:GLN8 3.6 20.4 0.5 OE1 A:GLU117 3.7 36.8 1.0 O A:HOH314 3.9 41.5 1.0 O A:HOH309 3.9 27.6 1.0 O A:HOH367 4.0 44.9 1.0 ND1 A:HIS65 4.2 18.6 1.0 O A:HOH390 4.3 41.5 1.0 CG A:GLU117 4.3 19.2 1.0 CG A:HIS65 4.3 21.1 1.0 O A:HOH386 4.4 47.3 1.0 O A:HOH376 4.5 29.6 1.0 CG A:GLN8 4.5 15.3 0.5 CG A:GLN8 4.5 17.0 0.5 NZ A:LYS105 4.9 32.9 1.0 CB A:ALA10 4.9 13.1 1.0

S.Venkadesh, M.Yoshinaga, B.Sankaran, P.Kandavelu, B.P.Rosen. Crystal Structure of C-As Lyase with Co(II) To Be Published.