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Cobalt in PDB 5mvt: Crystal Structure of An A-Dna Dodecamer Featuring An Alternating Pyrimidine-Purine Sequence

Protein crystallography data

The structure of Crystal Structure of An A-Dna Dodecamer Featuring An Alternating Pyrimidine-Purine Sequence, PDB code: 5mvt was solved by J.S.Hardwick, D.Ptchelkine, S.E.V.Phillips, T.Brown, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.36 / 1.90
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 44.288, 44.288, 57.841, 90.00, 90.00, 120.00
R / Rfree (%) 20.2 / 22.5

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of An A-Dna Dodecamer Featuring An Alternating Pyrimidine-Purine Sequence (pdb code 5mvt). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of An A-Dna Dodecamer Featuring An Alternating Pyrimidine-Purine Sequence, PDB code: 5mvt:

Cobalt binding site 1 out of 1 in 5mvt

Go back to Cobalt Binding Sites List in 5mvt
Cobalt binding site 1 out of 1 in the Crystal Structure of An A-Dna Dodecamer Featuring An Alternating Pyrimidine-Purine Sequence


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of An A-Dna Dodecamer Featuring An Alternating Pyrimidine-Purine Sequence within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Co101

b:81.7
occ:1.00
OP1 B:DA3 4.2 52.3 1.0

Reference:

J.S.Hardwick, D.Ptchelkine, A.H.El-Sagheer, I.Tear, D.Singleton, S.E.V.Phillips, A.N.Lane, T.Brown. 5-Formylcytosine Does Not Change the Global Structure of Dna. Nat. Struct. Mol. Biol. V. 24 544 2017.
ISSN: ESSN 1545-9985
PubMed: 28504696
DOI: 10.1038/NSMB.3411
Page generated: Sun Dec 13 10:48:09 2020

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