Cobalt in PDB 5nrb: A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (A-3GALT) Supports A Conserved Reaction Mechanism For Retaining Glycosyltransferases - Alpha-3GALT in Complex with CO2+, Udp-Gal and Lactose - A3GALT-CO2+-Udp-Gal-Lat-1

Enzymatic activity of A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (A-3GALT) Supports A Conserved Reaction Mechanism For Retaining Glycosyltransferases - Alpha-3GALT in Complex with CO2+, Udp-Gal and Lactose - A3GALT-CO2+-Udp-Gal-Lat-1

Protein crystallography data

Cobalt Binding Sites:

Cobalt binding site 1 out of 2 in 5nrb

Cobalt Binding Sites List in 5nrb

Cobalt binding site 1 out of 2 in the A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (A-3GALT) Supports A Conserved Reaction Mechanism For Retaining Glycosyltransferases - Alpha-3GALT in Complex with CO2+, Udp-Gal and Lactose - A3GALT-CO2+-Udp-Gal-Lat-1


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (A-3GALT) Supports A Conserved Reaction Mechanism For Retaining Glycosyltransferases - Alpha-3GALT in Complex with CO2+, Udp-Gal and Lactose - A3GALT-CO2+-Udp-Gal-Lat-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Co402 b:52.3 occ:0.51 O A:HOH505 2.1 53.1 0.5 O1B A:GDU403 2.2 54.8 0.5 O1A A:GDU403 2.3 52.7 0.5 OD2 A:ASP225 2.4 41.8 1.0 OD1 A:ASP227 2.7 51.2 1.0 HZ1 A:LYS359 2.7 91.5 1.0 HZ3 A:LYS359 2.8 91.5 1.0 OD2 A:ASP227 3.0 58.0 1.0 PB A:GDU403 3.0 45.7 0.5 HO2A A:GDU403 3.1 55.8 0.5 O3B A:GDU403 3.1 53.8 0.5 H5'1 A:GDU403 3.2 51.3 0.5 NZ A:LYS359 3.2 76.2 1.0 CG A:ASP227 3.2 48.5 1.0 HB3 A:ASP225 3.3 50.1 1.0 PA A:GDU403 3.3 48.8 0.5 O2' A:GDU403 3.4 46.5 0.5 O3A A:GDU403 3.4 48.2 0.5 CG A:ASP225 3.4 32.5 1.0 O3D A:GDU403 3.7 37.9 0.5 CB A:ASP225 3.7 41.7 1.0 HZ2 A:LYS359 3.8 91.5 1.0 HB2 A:ASP225 3.9 50.1 1.0 O A:HOH507 3.9 65.8 1.0 C1' A:GDU403 4.0 55.5 0.5 HE2 A:LYS359 4.1 90.9 1.0 HB2 A:ALA282 4.1 24.7 1.0 C5D A:GDU403 4.1 42.7 0.5 H1' A:GDU403 4.2 66.6 0.5 H3' A:GDU403 4.2 40.5 0.5 C2' A:GDU403 4.3 41.4 0.5 CE A:LYS359 4.3 75.7 1.0 O5D A:GDU403 4.3 44.8 0.5 HE2 A:HIS280 4.4 48.1 1.0 O2B A:GDU403 4.4 53.0 0.5 H3D A:GDU403 4.4 52.4 0.5 O2A A:GDU403 4.5 47.8 0.5 C3D A:GDU403 4.5 43.6 0.5 OD1 A:ASP225 4.5 36.9 1.0 HB1 A:ALA282 4.7 24.7 1.0 C4D A:GDU403 4.7 45.6 0.5 HG2 A:LYS359 4.7 0.1 1.0 CB A:ASP227 4.7 41.8 1.0 HG3 A:LYS359 4.7 0.1 1.0 H A:ASP227 4.8 29.0 1.0 CB A:ALA282 4.8 20.6 1.0 HE3 A:LYS359 4.8 90.9 1.0 C3' A:GDU403 4.8 33.8 0.5 O A:ASP227 4.9 37.6 1.0 H4D A:GDU403 4.9 54.7 0.5 H5'2 A:GDU403 4.9 51.3 0.5 HOA2 A:GDU403 4.9 57.4 0.5

Cobalt binding site 2 out of 2 in 5nrb

Cobalt Binding Sites List in 5nrb

Cobalt binding site 2 out of 2 in the A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (A-3GALT) Supports A Conserved Reaction Mechanism For Retaining Glycosyltransferases - Alpha-3GALT in Complex with CO2+, Udp-Gal and Lactose - A3GALT-CO2+-Udp-Gal-Lat-1


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (A-3GALT) Supports A Conserved Reaction Mechanism For Retaining Glycosyltransferases - Alpha-3GALT in Complex with CO2+, Udp-Gal and Lactose - A3GALT-CO2+-Udp-Gal-Lat-1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Co401 b:49.8 occ:0.59 O B:HOH528 2.2 45.9 1.0 O1A B:GDU402 2.3 44.6 0.6 OD2 B:ASP227 2.3 52.2 1.0 O1B B:GDU402 2.4 49.8 0.6 O B:HOH574 2.8 51.8 0.6 CG B:ASP227 3.1 44.9 1.0 OD1 B:ASP227 3.1 44.8 1.0 PB B:GDU402 3.2 54.3 0.6 PA B:GDU402 3.3 43.5 0.6 O3A B:GDU402 3.4 40.2 0.6 O3B B:GDU402 3.6 53.2 0.6 H5'1 B:GDU402 4.0 53.7 0.6 O2A B:GDU402 4.1 53.0 0.6 HOA2 B:GDU402 4.3 63.7 0.6 HO2A B:GDU402 4.4 46.2 0.6 OD2 B:ASP225 4.5 46.9 1.0 CB B:ASP227 4.5 36.6 1.0 HB3 B:ASP225 4.5 46.2 1.0 O5D B:GDU402 4.6 40.4 0.6 HB2 B:ASP227 4.6 43.9 1.0 O3D B:GDU402 4.7 40.9 0.6 O2B B:GDU402 4.7 52.0 0.6 HH B:TYR139 4.7 80.0 1.0 HE1 B:TYR139 4.7 78.3 1.0 H3D B:GDU402 4.8 62.1 0.6 C5D B:GDU402 4.8 44.7 0.6 HB3 B:ASP227 4.8 43.9 1.0 C1' B:GDU402 4.8 45.1 0.6 O2' B:GDU402 5.0 38.5 0.6 H1' B:GDU402 5.0 54.2 0.6

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