Cobalt in PDB 5sbi: The Crystal Structure of Metp in Complex with Co at A Resolution of 1.80A.

The structure of The Crystal Structure of Metp in Complex with Co at A Resolution of 1.80A., PDB code: 5sbi was solved by L.Di Costanzo, S.La Gatta, L.Leone, M.Chino, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.05 / 1.80
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	37.264, 56.18, 19.225, 90, 90, 90
R / Rfree (%)	14.4 / 18.1

The binding sites of Cobalt atom in the The Crystal Structure of Metp in Complex with Co at A Resolution of 1.80A. (pdb code 5sbi). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the The Crystal Structure of Metp in Complex with Co at A Resolution of 1.80A., PDB code: 5sbi:

Cobalt binding site 1 out of 1 in the The Crystal Structure of Metp in Complex with Co at A Resolution of 1.80A.


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of The Crystal Structure of Metp in Complex with Co at A Resolution of 1.80A. within 5.0Å range: probe atom residue distance (Å) B Occ C:Co101 b:10.3 occ:1.00 SG C:CYS2 2.3 9.4 1.0 SG C:CYS5 2.3 10.0 1.0 SG C:CYS20 2.3 8.5 1.0 SG C:CYS17 2.3 9.4 1.0 HB3 C:CYS2 3.0 8.6 1.0 H C:CYS20 3.0 15.3 1.0 CB C:CYS2 3.1 7.2 1.0 HB3 C:CYS17 3.1 8.9 1.0 HB3 C:CYS5 3.2 12.7 1.0 HB3 C:CYS20 3.2 14.2 1.0 CB C:CYS17 3.2 7.4 1.0 HB2 C:CYS2 3.2 8.6 1.0 HB2 C:CYS17 3.3 8.9 1.0 CB C:CYS20 3.3 11.8 1.0 CB C:CYS5 3.3 10.6 1.0 H C:CYS5 3.4 12.5 1.0 HB3 C:ASN19 3.7 13.1 1.0 HB3 C:ALA22 3.7 18.2 1.0 N C:CYS20 3.7 12.8 1.0 HB2 C:ASP4 3.8 11.1 1.0 N C:CYS5 3.8 10.4 1.0 HB3 C:ALA7 3.9 14.2 1.0 HB2 C:ALA22 4.0 18.2 1.0 H C:ALA22 4.0 11.4 1.0 CA C:CYS20 4.1 9.8 1.0 H C:ALA7 4.1 14.3 1.0 HB2 C:CYS5 4.1 12.7 1.0 HD22 C:ASN19 4.1 18.7 1.0 HB2 C:CYS20 4.1 14.2 1.0 CA C:CYS5 4.1 9.1 1.0 CB C:ALA22 4.3 15.2 1.0 HB2 C:ALA7 4.4 14.2 1.0 H C:ASP4 4.5 11.2 1.0 HB3 C:ASP4 4.5 11.1 1.0 CB C:ASP4 4.5 9.2 1.0 H C:GLY6 4.5 11.3 1.0 CA C:CYS2 4.5 9.7 1.0 H C:ASN19 4.6 11.1 1.0 CB C:ALA7 4.6 11.9 1.0 H C:GLY21 4.6 11.8 1.0 CB C:ASN19 4.6 10.9 1.0 CA C:CYS17 4.6 9.2 1.0 C C:ASP4 4.7 11.4 1.0 C C:CYS20 4.7 9.8 1.0 C C:CYS5 4.8 11.6 1.0 N C:ALA22 4.8 9.5 1.0 C C:ASN19 4.9 14.1 1.0 N C:GLY21 4.9 9.8 1.0 N C:GLY6 4.9 9.4 1.0 HA C:CYS2 4.9 11.7 1.0 N C:ALA7 4.9 11.9 1.0 HA C:CYS20 4.9 11.7 1.0 ND2 C:ASN19 4.9 15.6 1.0 HA C:CYS5 5.0 11.0 1.0 CA C:ASP4 5.0 9.7 1.0 HA C:CYS17 5.0 11.1 1.0 C C:CYS2 5.0 10.5 1.0 N C:ASP4 5.0 9.4 1.0

M.Chino, L.Di Costanzo. Miniaturization Process Reloaded - Structural and Functional Insights From A Miniaturized Rubredoxin To Be Published.