Atomistry » Cobalt » PDB 5zt7-6eg9 » 6auh
Atomistry »
  Cobalt »
    PDB 5zt7-6eg9 »
      6auh »

Cobalt in PDB 6auh: Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A

Protein crystallography data

The structure of Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A, PDB code: 6auh was solved by L.Olshansky, J.Vallapurakal, R.Huerta-Lavorie, A.I.Nguyen, T.D.Tilley, A.S.Borovik, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.29 / 1.60
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 57.701, 57.701, 183.768, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 21.9

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A (pdb code 6auh). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total 4 binding sites of Cobalt where determined in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A, PDB code: 6auh:
Jump to Cobalt binding site number: 1; 2; 3; 4;

Cobalt binding site 1 out of 4 in 6auh

Go back to Cobalt Binding Sites List in 6auh
Cobalt binding site 1 out of 4 in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:43.0
occ:0.80
CO4 A:OL5201 0.0 43.0 0.8
O05 A:OL5201 1.8 41.1 0.8
O15 A:OL5201 1.9 38.4 0.8
O07 A:OL5201 1.9 42.3 0.8
O12 A:OL5201 2.0 32.4 0.8
O03 A:OL5201 2.0 39.7 0.8
N07 A:OL5201 2.3 43.4 0.8
CO2 A:OL5201 2.6 43.8 0.8
CO3 A:OL5201 2.6 50.9 0.8
CO1 A:OL5201 2.7 47.7 0.8
C04 A:OL5201 3.0 39.7 0.8
C40 A:OL5201 3.1 50.0 0.8
C44 A:OL5201 3.1 44.8 0.8
O06 A:OL5201 3.2 40.8 0.8
O14 A:OL5201 3.3 41.8 0.8
N05 A:OL5201 4.3 46.1 0.8
O09 A:OL5201 4.3 43.2 0.8
O11 A:OL5201 4.3 47.1 0.8
C37 A:OL5201 4.3 25.9 0.8
O08 A:OL5201 4.3 42.0 0.8
N06 A:OL5201 4.3 49.2 0.8
C41 A:OL5201 4.4 50.9 0.8
O10 A:OL5201 4.4 47.5 0.8
C43 A:OL5201 4.5 48.3 0.8
C02 A:OL5201 4.6 19.8 0.8
C32 A:OL5201 4.6 44.5 0.8
C28 A:OL5201 4.7 50.8 0.8
C16 A:OL5201 4.9 50.8 0.8
C42 A:OL5201 5.0 43.3 0.8

Cobalt binding site 2 out of 4 in 6auh

Go back to Cobalt Binding Sites List in 6auh
Cobalt binding site 2 out of 4 in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:47.7
occ:0.80
CO1 A:OL5201 0.0 47.7 0.8
O05 A:OL5201 1.8 41.1 0.8
O10 A:OL5201 2.0 47.5 0.8
O06 A:OL5201 2.0 40.8 0.8
O07 A:OL5201 2.0 42.3 0.8
O08 A:OL5201 2.0 42.0 0.8
CO2 A:OL5201 2.7 43.8 0.8
CO4 A:OL5201 2.7 43.0 0.8
CO3 A:OL5201 2.7 50.9 0.8
C16 A:OL5201 2.9 50.8 0.8
O11 A:OL5201 3.1 47.1 0.8
O09 A:OL5201 3.3 43.2 0.8
O12 A:OL5201 3.5 32.4 0.8
N07 A:OL5201 3.5 43.4 0.8
C40 A:OL5201 4.0 50.0 0.8
O03 A:OL5201 4.2 39.7 0.8
C17 A:OL5201 4.3 48.0 0.8
O14 A:OL5201 4.3 41.8 0.8
C44 A:OL5201 4.3 44.8 0.8
O15 A:OL5201 4.3 38.4 0.8
N05 A:OL5201 4.4 46.1 0.8
N06 A:OL5201 4.6 49.2 0.8
C04 A:OL5201 4.7 39.7 0.8
C24 A:OL5201 4.8 53.0 0.8

Cobalt binding site 3 out of 4 in 6auh

Go back to Cobalt Binding Sites List in 6auh
Cobalt binding site 3 out of 4 in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 3 of Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:50.9
occ:0.80
CO3 A:OL5201 0.0 50.9 0.8
O06 A:OL5201 1.8 40.8 0.8
O12 A:OL5201 1.8 32.4 0.8
O07 A:OL5201 1.9 42.3 0.8
O11 A:OL5201 2.1 47.1 0.8
N06 A:OL5201 2.1 49.2 0.8
CO4 A:OL5201 2.6 43.0 0.8
CO2 A:OL5201 2.7 43.8 0.8
CO1 A:OL5201 2.7 47.7 0.8
C28 A:OL5201 3.0 50.8 0.8
C34 A:OL5201 3.1 53.4 0.8
O15 A:OL5201 3.1 38.4 0.8
C16 A:OL5201 3.2 50.8 0.8
O05 A:OL5201 3.3 41.1 0.8
O10 A:OL5201 3.5 47.5 0.8
N05 A:OL5201 3.5 46.1 0.8
C32 A:OL5201 4.1 44.5 0.8
C24 A:OL5201 4.2 53.0 0.8
O03 A:OL5201 4.2 39.7 0.8
C29 A:OL5201 4.3 52.8 0.8
C35 A:OL5201 4.3 50.2 0.8
O08 A:OL5201 4.4 42.0 0.8
O14 A:OL5201 4.4 41.8 0.8
O09 A:OL5201 4.4 43.2 0.8
N07 A:OL5201 4.5 43.4 0.8
C17 A:OL5201 4.7 48.0 0.8
C04 A:OL5201 4.7 39.7 0.8
C30 A:OL5201 4.8 50.2 0.8
C40 A:OL5201 5.0 50.0 0.8

Cobalt binding site 4 out of 4 in 6auh

Go back to Cobalt Binding Sites List in 6auh
Cobalt binding site 4 out of 4 in the Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 4 of Artificial Metalloproteins Containing A CO4O4 Active Site - 2XM-S112Y- A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co201

b:43.8
occ:0.80
CO2 A:OL5201 0.0 43.8 0.8
N05 A:OL5201 2.0 46.1 0.8
O14 A:OL5201 2.0 41.8 0.8
O05 A:OL5201 2.0 41.1 0.8
O06 A:OL5201 2.0 40.8 0.8
O09 A:OL5201 2.0 43.2 0.8
O12 A:OL5201 2.1 32.4 0.8
CO4 A:OL5201 2.6 43.0 0.8
CO1 A:OL5201 2.7 47.7 0.8
CO3 A:OL5201 2.7 50.9 0.8
C04 A:OL5201 2.8 39.7 0.8
C32 A:OL5201 2.8 44.5 0.8
C24 A:OL5201 2.9 53.0 0.8
O03 A:OL5201 3.0 39.7 0.8
O08 A:OL5201 3.3 42.0 0.8
O07 A:OL5201 3.3 42.3 0.8
N06 A:OL5201 3.5 49.2 0.8
O15 A:OL5201 4.1 38.4 0.8
C28 A:OL5201 4.1 50.8 0.8
O11 A:OL5201 4.2 47.1 0.8
C33 A:OL5201 4.2 45.7 0.8
C37 A:OL5201 4.2 25.9 0.8
C25 A:OL5201 4.2 52.6 0.8
O10 A:OL5201 4.2 47.5 0.8
C34 A:OL5201 4.2 53.4 0.8
N07 A:OL5201 4.4 43.4 0.8
C16 A:OL5201 4.7 50.8 0.8
C26 A:OL5201 4.7 53.2 0.8
CE1 A:TYR112 4.8 35.2 1.0
CZ A:TYR112 4.9 39.2 1.0
C44 A:OL5201 4.9 44.8 0.8
OH A:TYR112 5.0 46.0 1.0

Reference:

L.Olshansky, R.Huerta-Lavorie, A.I.Nguyen, J.Vallapurackal, A.Furst, T.D.Tilley, A.S.Borovik. Artificial Metalloproteins Containing Co J. Am. Chem. Soc. V. 140 2739 2018.
ISSN: ESSN 1520-5126
PubMed: 29401385
DOI: 10.1021/JACS.7B13052
Page generated: Tue Jul 30 18:26:56 2024

Last articles

Mg in 4Y52
Mg in 4Y30
Mg in 4Y2V
Mg in 4Y2X
Mg in 4Y2Y
Mg in 4Y2U
Mg in 4Y2T
Mg in 4Y2Q
Mg in 4Y2R
Mg in 4Y2S
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy