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Cobalt in PDB 6cq3: Crystal Structure of Dna Dodecamer D(Cgcgaattcgcg)

Protein crystallography data

The structure of Crystal Structure of Dna Dodecamer D(Cgcgaattcgcg), PDB code: 6cq3 was solved by J.L.Delgado, N.R.Vance, R.J.Kerns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.38 / 1.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 24.330, 40.510, 65.030, 90.00, 90.00, 90.00
R / Rfree (%) 14.9 / 18.9

Other elements in 6cq3:

The structure of Crystal Structure of Dna Dodecamer D(Cgcgaattcgcg) also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Crystal Structure of Dna Dodecamer D(Cgcgaattcgcg) (pdb code 6cq3). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Crystal Structure of Dna Dodecamer D(Cgcgaattcgcg), PDB code: 6cq3:

Cobalt binding site 1 out of 1 in 6cq3

Go back to Cobalt Binding Sites List in 6cq3
Cobalt binding site 1 out of 1 in the Crystal Structure of Dna Dodecamer D(Cgcgaattcgcg)


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Crystal Structure of Dna Dodecamer D(Cgcgaattcgcg) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co103

b:13.8
occ:1.00
O A:HOH251 1.9 19.0 1.0
O A:HOH285 1.9 15.4 0.9
O A:HOH250 2.0 16.1 0.9
O A:HOH282 2.0 22.2 1.0
O A:HOH293 2.0 21.1 0.9
O A:HOH252 2.0 16.1 1.0
O A:HOH212 3.8 18.0 0.9
O A:HOH277 4.0 37.4 1.0
O6 A:DG12 4.1 9.8 1.0
N7 A:DG12 4.3 11.0 1.0
C6 A:DG12 4.9 9.6 1.0
H42 B:DC13 4.9 14.3 1.0
C5 A:DG12 4.9 9.9 1.0

Reference:

J.L.Delgado, N.R.Vance, R.J.Kerns. Crystal Structure of Dna Dodecamer D(Cgcgaattcgcg) To Be Published.
Page generated: Sun Dec 13 10:49:48 2020

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