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Cobalt in PDB 6efi: SK678 Binding Region (Siglec + Unique)

Protein crystallography data

The structure of SK678 Binding Region (Siglec + Unique), PDB code: 6efi was solved by T.M.Iverson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.72 / 1.72
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 59.624, 59.579, 61.832, 90.00, 100.74, 90.00
R / Rfree (%) 18.1 / 21.2

Other elements in 6efi:

The structure of SK678 Binding Region (Siglec + Unique) also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Cobalt Binding Sites:

The binding sites of Cobalt atom in the SK678 Binding Region (Siglec + Unique) (pdb code 6efi). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the SK678 Binding Region (Siglec + Unique), PDB code: 6efi:

Cobalt binding site 1 out of 1 in 6efi

Go back to Cobalt Binding Sites List in 6efi
Cobalt binding site 1 out of 1 in the SK678 Binding Region (Siglec + Unique)


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of SK678 Binding Region (Siglec + Unique) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co502

b:21.6
occ:1.00
O A:HOH787 2.2 25.4 1.0
O A:HOH745 2.3 25.3 1.0
O A:HOH765 2.3 25.1 1.0
OD2 A:ASP457 3.9 26.2 1.0
O A:LEU458 4.2 16.5 1.0
OD1 A:ASP457 4.2 18.5 1.0
O A:HOH657 4.3 32.0 1.0
O A:HOH729 4.3 33.5 1.0
CG A:ASP457 4.5 21.9 1.0
O A:ASN399 4.9 23.3 0.5
O A:ASN399 4.9 23.3 0.5

Reference:

T.M.Iverson, T.M.Iverson. N/A N/A.
Page generated: Tue Jul 30 18:34:28 2024

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