Cobalt in PDB 6gn3: Racemic Crystal Structure of A-Dna Duplex Formed From D(Cccggg) in Space Group P21/N

The structure of Racemic Crystal Structure of A-Dna Duplex Formed From D(Cccggg) in Space Group P21/N, PDB code: 6gn3 was solved by P.K.Mandal, G.W.Collie, B.Kauffmann, I.Huc, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.49 / 2.80
Space group	P 1 21/n 1
Cell size a, b, c (Å), α, β, γ (°)	48.883, 41.430, 71.958, 90.00, 97.47, 90.00
R / Rfree (%)	28 / 31.8

The structure of Racemic Crystal Structure of A-Dna Duplex Formed From D(Cccggg) in Space Group P21/N also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Cobalt atom in the Racemic Crystal Structure of A-Dna Duplex Formed From D(Cccggg) in Space Group P21/N (pdb code 6gn3). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total 2 binding sites of Cobalt where determined in the Racemic Crystal Structure of A-Dna Duplex Formed From D(Cccggg) in Space Group P21/N, PDB code: 6gn3:
Jump to Cobalt binding site number: 1; 2;

Cobalt binding site 1 out of 2 in the Racemic Crystal Structure of A-Dna Duplex Formed From D(Cccggg) in Space Group P21/N


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Racemic Crystal Structure of A-Dna Duplex Formed From D(Cccggg) in Space Group P21/N within 5.0Å range: probe atom residue distance (Å) B Occ B:Co101 b:94.2 occ:1.00 N7 B:DG11 2.4 39.4 1.0 C8 B:DG11 3.3 40.9 1.0 C5 B:DG11 3.5 28.8 1.0 O6 B:DG11 3.7 36.9 1.0 N7 B:DG10 3.7 34.3 1.0 C6 B:DG11 3.9 29.9 1.0 C8 B:DG10 4.3 36.6 1.0 C5 B:DG10 4.3 23.6 1.0 CAD A:TMO101 4.3 42.4 1.0 OP2 B:DG10 4.4 31.6 1.0 N9 B:DG11 4.5 36.0 1.0 C4 B:DG11 4.6 34.0 1.0 O6 B:DG10 4.6 36.9 1.0 C6 B:DG10 4.7 23.1 1.0

Cobalt binding site 2 out of 2 in the Racemic Crystal Structure of A-Dna Duplex Formed From D(Cccggg) in Space Group P21/N


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 2 of Racemic Crystal Structure of A-Dna Duplex Formed From D(Cccggg) in Space Group P21/N within 5.0Å range: probe atom residue distance (Å) B Occ D:Co101 b:63.4 occ:1.00 N7 D:DG11 2.3 44.1 1.0 C8 D:DG11 3.3 43.9 1.0 C5 D:DG11 3.4 36.0 1.0 O6 D:DG11 3.5 40.0 1.0 C6 D:DG11 3.8 34.6 1.0 N7 D:DG10 4.3 45.1 1.0 N9 D:DG11 4.5 44.2 1.0 C4 D:DG11 4.5 39.2 1.0 C5 D:DG10 4.7 36.0 1.0 C8 D:DG10 4.7 43.8 1.0 O6 D:DG12 4.9 48.5 1.0

P.K.Mandal, G.W.Collie, B.Kauffmann, I.Huc. Racemic Crystal Structures of A-Dna Duplexes To Be Published.