Cobalt in PDB 6gza: Structure of Murine Leukemia Virus Capsid C-Terminal Domain

The structure of Structure of Murine Leukemia Virus Capsid C-Terminal Domain, PDB code: 6gza was solved by K.Qu, M.Dolezal, F.K.M.Schur, B.Murciano, M.Rumlova, T.Ruml, J.A.G.Briggs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.60 / 1.89
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	71.198, 71.198, 77.068, 90.00, 90.00, 120.00
R / Rfree (%)	17.6 / 21.8

The binding sites of Cobalt atom in the Structure of Murine Leukemia Virus Capsid C-Terminal Domain (pdb code 6gza). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Structure of Murine Leukemia Virus Capsid C-Terminal Domain, PDB code: 6gza:

Cobalt binding site 1 out of 1 in the Structure of Murine Leukemia Virus Capsid C-Terminal Domain


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Structure of Murine Leukemia Virus Capsid C-Terminal Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Co101 b:11.3 occ:1.00 O A:SER1 2.2 26.5 1.0 O A:ARG32 2.2 25.0 1.0 N A:SER1 2.3 28.0 1.0 C A:SER1 3.0 25.2 1.0 CA A:SER1 3.1 25.6 1.0 C A:ARG32 3.4 24.6 1.0 O A:HOH250 3.6 28.1 1.0 CB A:SER1 3.9 22.4 1.0 CA A:ARG32 4.1 20.0 1.0 O A:ARG31 4.2 20.6 1.0 N A:PRO2 4.3 23.2 1.0 N A:TYR33 4.3 23.3 1.0 CA A:TYR33 4.6 25.7 1.0 OG A:SER1 4.7 25.9 1.0 CG A:ARG32 4.8 29.3 1.0 CA A:PRO2 5.0 25.0 1.0

K.Qu, B.Glass, M.Dolezal, F.K.M.Schur, B.Murciano, A.Rein, M.Rumlova, T.Ruml, H.G.Krausslich, J.A.G.Briggs. Structure and Architecture of Immature and Mature Murine Leukemia Virus Capsids. Proc. Natl. Acad. Sci. V. 115 11751 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 30478053
DOI: 10.1073/PNAS.1811580115