Cobalt in PDB 6hvl: Cdaa Complex with C-Di-Amp and Amp

All present enzymatic activity of Cdaa Complex with C-Di-Amp and Amp:
2.7.7.85;

The structure of Cdaa Complex with C-Di-Amp and Amp, PDB code: 6hvl was solved by J.L.Heidemann, P.Neumann, R.Ficner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.27 / 2.80
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	121.900, 121.900, 141.160, 90.00, 90.00, 120.00
R / Rfree (%)	18.8 / 23.4

The binding sites of Cobalt atom in the Cdaa Complex with C-Di-Amp and Amp (pdb code 6hvl). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Cdaa Complex with C-Di-Amp and Amp, PDB code: 6hvl:

Cobalt binding site 1 out of 1 in the Cdaa Complex with C-Di-Amp and Amp


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Cdaa Complex with C-Di-Amp and Amp within 5.0Å range: probe atom residue distance (Å) B Occ A:Co202 b:0.6 occ:1.00 OE1 A:GLU124 2.1 0.3 1.0 O2P A:2BA201 2.4 52.1 1.0 CD A:GLU124 3.3 0.9 1.0 P A:2BA201 3.7 38.6 1.0 OE2 A:GLU124 4.2 0.0 1.0 CG A:GLU124 4.2 0.1 1.0 O3'1 A:2BA201 4.6 38.3 1.0 OE2 A:GLU123 4.6 61.2 1.0 O5' A:2BA201 4.9 43.8 1.0 C5' A:2BA201 5.0 38.0 1.0

J.L.Heidemann, P.Neumann, A.Dickmanns, R.Ficner. Crystal Structures of the C-Di-Amp-Synthesizing Enzyme Cdaa. J.Biol.Chem. V. 294 10463 2019.
ISSN: ESSN 1083-351X
PubMed: 31118276
DOI: 10.1074/JBC.RA119.009246