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Cobalt in PDB 6jx9: Structure of Y17107 Complexed Hppd

Enzymatic activity of Structure of Y17107 Complexed Hppd

All present enzymatic activity of Structure of Y17107 Complexed Hppd:
1.13.11.27;

Protein crystallography data

The structure of Structure of Y17107 Complexed Hppd, PDB code: 6jx9 was solved by H.Y.Lin, G.F.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.49 / 1.80
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 76.939, 84.367, 62.115, 90.00, 100.21, 90.00
R / Rfree (%) 19.4 / 22.4

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Structure of Y17107 Complexed Hppd (pdb code 6jx9). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Structure of Y17107 Complexed Hppd, PDB code: 6jx9:

Cobalt binding site 1 out of 1 in 6jx9

Go back to Cobalt Binding Sites List in 6jx9
Cobalt binding site 1 out of 1 in the Structure of Y17107 Complexed Hppd


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Structure of Y17107 Complexed Hppd within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co502

b:33.0
occ:1.00
O20 A:CQC501 2.0 32.5 1.0
O12 A:CQC501 2.0 37.3 1.0
OE1 A:GLU394 2.1 26.1 1.0
NE2 A:HIS308 2.4 29.1 1.0
NE2 A:HIS226 2.5 32.1 1.0
O A:HOH631 2.5 28.4 1.0
C10 A:CQC501 3.0 40.6 1.0
C16 A:CQC501 3.0 38.3 1.0
CE1 A:HIS308 3.1 32.1 1.0
CD A:GLU394 3.2 32.2 1.0
CE1 A:HIS226 3.3 26.4 1.0
C11 A:CQC501 3.4 38.1 1.0
CD2 A:HIS308 3.5 31.1 1.0
OE2 A:GLU394 3.5 35.8 1.0
CD2 A:HIS226 3.5 26.4 1.0
N17 A:CQC501 4.3 37.4 1.0
C01 A:CQC501 4.3 40.5 1.0
ND1 A:HIS308 4.3 30.0 1.0
CG2 A:VAL228 4.4 27.3 1.0
O A:PHE419 4.5 36.4 1.0
ND1 A:HIS226 4.5 32.2 1.0
CG A:GLU394 4.5 29.6 1.0
CG A:HIS308 4.5 29.6 1.0
CB A:ALA310 4.5 27.3 1.0
CG A:HIS226 4.6 28.9 1.0
CE2 A:PHE381 4.7 37.8 1.0
CB A:GLU394 4.8 26.2 1.0
C19 A:CQC501 4.8 44.0 1.0
CD2 A:PHE419 4.8 32.9 1.0
CB A:PHE419 4.8 36.8 1.0
C21 A:CQC501 4.9 39.3 1.0

Reference:

H.Y.Lin, G.F.Yang. Structure of Y17107 Complexed Hppd To Be Published.
Page generated: Sun Dec 13 10:50:27 2020

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