Cobalt in PDB 6m6d: Structure of Hppd Complexed with A Synthesized Inhibitor

All present enzymatic activity of Structure of Hppd Complexed with A Synthesized Inhibitor:
1.13.11.27;

The structure of Structure of Hppd Complexed with A Synthesized Inhibitor, PDB code: 6m6d was solved by H.-Y.Lin, W.-C.Yang, G.-F.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.70 / 1.84
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	76.568, 83.736, 61.96, 90, 100.47, 90
R / Rfree (%)	18.3 / 21.5

The structure of Structure of Hppd Complexed with A Synthesized Inhibitor also contains other interesting chemical elements:

Silicon

(Si)

1 atom

The binding sites of Cobalt atom in the Structure of Hppd Complexed with A Synthesized Inhibitor (pdb code 6m6d). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Structure of Hppd Complexed with A Synthesized Inhibitor, PDB code: 6m6d:

Cobalt binding site 1 out of 1 in the Structure of Hppd Complexed with A Synthesized Inhibitor


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Structure of Hppd Complexed with A Synthesized Inhibitor within 5.0Å range: probe atom residue distance (Å) B Occ A:Co501 b:15.5 occ:1.00 O16 A:NJX502 2.0 13.8 1.0 O10 A:NJX502 2.0 18.5 1.0 OE1 A:GLU394 2.1 11.9 1.0 NE2 A:HIS308 2.2 13.2 1.0 NE2 A:HIS226 2.3 15.6 1.0 O A:HOH644 2.3 12.0 1.0 CE1 A:HIS308 3.1 15.7 1.0 CD A:GLU394 3.1 14.5 1.0 C8 A:NJX502 3.1 19.5 1.0 C11 A:NJX502 3.2 21.2 1.0 CE1 A:HIS226 3.2 12.5 1.0 CD2 A:HIS308 3.3 14.2 1.0 CD2 A:HIS226 3.3 14.0 1.0 OE2 A:GLU394 3.4 16.9 1.0 C9 A:NJX502 3.6 21.0 1.0 ND1 A:HIS308 4.2 13.1 1.0 C1 A:NJX502 4.3 21.5 1.0 ND1 A:HIS226 4.3 14.9 1.0 CG A:HIS308 4.4 14.4 1.0 O A:PHE419 4.4 20.4 1.0 CB A:ALA310 4.4 12.4 1.0 CG A:GLU394 4.4 12.9 1.0 CG A:HIS226 4.4 13.3 1.0 C12 A:NJX502 4.5 18.4 1.0 CG2 A:VAL228 4.5 14.8 1.0 CE2 A:PHE381 4.5 15.7 1.0 CB A:GLU394 4.6 14.2 1.0 C7 A:NJX502 4.7 21.4 1.0 CD2 A:PHE419 4.7 16.2 1.0 CB A:PHE419 4.8 18.1 1.0 C6 A:NJX502 4.9 21.0 1.0 CZ A:PHE381 5.0 20.1 1.0

H.-Y.Lin, W.-C.Yang, G.-F.Yang. Structure of Hppd Complexed with A Synthesized Inhibitor To Be Published.