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Cobalt in PDB 6ogh: Structure of Aedes Aegypti OBP22 in the Complex with Linoleic Acid

Protein crystallography data

The structure of Structure of Aedes Aegypti OBP22 in the Complex with Linoleic Acid, PDB code: 6ogh was solved by D.N.Jones, J.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.00 / 1.85
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 55.964, 42.843, 49.320, 90.00, 92.78, 90.00
R / Rfree (%) 16.6 / 20.6

Other elements in 6ogh:

The structure of Structure of Aedes Aegypti OBP22 in the Complex with Linoleic Acid also contains other interesting chemical elements:

Cadmium (Cd) 2 atoms

Cobalt Binding Sites:

The binding sites of Cobalt atom in the Structure of Aedes Aegypti OBP22 in the Complex with Linoleic Acid (pdb code 6ogh). This binding sites where shown within 5.0 Angstroms radius around Cobalt atom.
In total only one binding site of Cobalt was determined in the Structure of Aedes Aegypti OBP22 in the Complex with Linoleic Acid, PDB code: 6ogh:

Cobalt binding site 1 out of 1 in 6ogh

Go back to Cobalt Binding Sites List in 6ogh
Cobalt binding site 1 out of 1 in the Structure of Aedes Aegypti OBP22 in the Complex with Linoleic Acid


Mono view


Stereo pair view

A full contact list of Cobalt with other atoms in the Co binding site number 1 of Structure of Aedes Aegypti OBP22 in the Complex with Linoleic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Co203

b:20.1
occ:0.56
O A:HOH328 2.1 33.0 1.0
OD1 A:ASP123 2.1 61.3 1.0
O A:HOH414 2.2 37.3 1.0
O A:HOH360 2.2 33.2 1.0
ND1 A:HIS74 2.3 25.3 1.0
CG A:ASP123 2.7 59.4 1.0
OD2 A:ASP123 2.7 56.8 1.0
CE1 A:HIS74 3.2 25.8 1.0
HB3 A:HIS74 3.2 20.2 1.0
CG A:HIS74 3.3 22.3 1.0
HE1 A:HIS74 3.3 25.5 1.0
CB A:HIS74 3.6 19.9 1.0
HB2 A:HIS74 3.7 20.2 1.0
O A:HOH403 3.9 32.9 1.0
HA A:SER119 4.0 24.2 1.0
O A:ALA118 4.2 24.1 1.0
CB A:ASP123 4.2 59.4 1.0
NE2 A:HIS74 4.3 25.4 1.0
O A:HOH333 4.4 21.0 1.0
CD2 A:HIS74 4.4 24.5 1.0
HA A:ASP123 4.4 59.3 1.0
O A:LYS121 4.5 46.3 1.0
HB3 A:ASP123 4.6 59.4 1.0
HB2 A:ASP123 4.7 59.4 1.0
O A:HOH309 4.8 25.1 1.0
CA A:ASP123 4.8 59.4 1.0
CA A:SER119 4.9 24.0 1.0
O A:SER119 5.0 25.8 1.0

Reference:

D.N.Jones, J.Wang. Structure of Aedes Aegypti OBP22 in the Complex with Linoleic Acid To Be Published.
Page generated: Sun Dec 13 10:51:23 2020

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